Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1022
(395 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 29 4.2
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 29 4.2
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 29 4.2
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 29 4.2
BC132751-1|AAI32752.1| 482|Homo sapiens chromosome 7 open readi... 28 9.7
BC132749-1|AAI32750.1| 482|Homo sapiens chromosome 7 open readi... 28 9.7
BC010130-1|AAH10130.1| 482|Homo sapiens chromosome 7 open readi... 28 9.7
AF151801-1|AAD34038.1| 483|Homo sapiens CGI-43 protein protein. 28 9.7
AC079882-1|AAQ93370.1| 482|Homo sapiens unknown protein. 28 9.7
AC004983-1|AAQ96868.1| 482|Homo sapiens unknown protein. 28 9.7
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 130 DYIVSNERSYLCLPAYKFELTFTPSRT 210
DY+V SY+C P Y EL + RT
Sbjct: 2982 DYVVGQNVSYMCQPGYTMELNGSRIRT 3008
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 130 DYIVSNERSYLCLPAYKFELTFTPSRT 210
DY+V SY+C P Y EL + RT
Sbjct: 3148 DYVVGQNVSYMCQPGYTMELNGSRIRT 3174
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 130 DYIVSNERSYLCLPAYKFELTFTPSRT 210
DY+V SY+C P Y EL + RT
Sbjct: 3188 DYVVGQNVSYMCQPGYTMELNGSRIRT 3214
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 130 DYIVSNERSYLCLPAYKFELTFTPSRT 210
DY+V SY+C P Y EL + RT
Sbjct: 2458 DYVVGQNVSYMCQPGYTMELNGSRIRT 2484
>BC132751-1|AAI32752.1| 482|Homo sapiens chromosome 7 open reading
frame 28A protein.
Length = 482
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 34 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
>BC132749-1|AAI32750.1| 482|Homo sapiens chromosome 7 open reading
frame 28A protein.
Length = 482
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 34 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
>BC010130-1|AAH10130.1| 482|Homo sapiens chromosome 7 open reading
frame 28B protein.
Length = 482
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 34 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
>AF151801-1|AAD34038.1| 483|Homo sapiens CGI-43 protein protein.
Length = 483
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 35 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 86
>AC079882-1|AAQ93370.1| 482|Homo sapiens unknown protein.
Length = 482
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 34 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
>AC004983-1|AAQ96868.1| 482|Homo sapiens unknown protein.
Length = 482
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 82 FGFRESQTQLKLLLFG-DYIVSNERSY---LCLPAYKFELTFTPSRTLKN*H 225
FG RE Q + K+L + + + NE+ LC +F TF+PS+ K+ H
Sbjct: 34 FGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,396,079
Number of Sequences: 237096
Number of extensions: 666168
Number of successful extensions: 827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -