BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1022 (395 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p pro... 27 9.0 AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB... 27 9.0 AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA... 27 9.0 >AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p protein. Length = 1916 Score = 27.1 bits (57), Expect = 9.0 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = -2 Query: 253 NQLLRLMCFSASFLTFSMA*KLTQICMQVSIDSFVR*KQYNHQKVKVLIVSATREIRRLK 74 NQ L+++ S S+ +L Q+ + D+ ++ HQK+ +V A +EI RLK Sbjct: 217 NQKLKVLLSQESKNVLSLTEELNQLLSEK--DNVLQ----EHQKMSDDLVLANKEIERLK 270 Query: 73 IYNETLRLNDVTVTRLSN 20 +E L ++ V +L+N Sbjct: 271 -KDEQLARAEIKVLQLAN 287 >AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB, isoform B protein. Length = 1916 Score = 27.1 bits (57), Expect = 9.0 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = -2 Query: 253 NQLLRLMCFSASFLTFSMA*KLTQICMQVSIDSFVR*KQYNHQKVKVLIVSATREIRRLK 74 NQ L+++ S S+ +L Q+ + D+ ++ HQK+ +V A +EI RLK Sbjct: 217 NQKLKVLLSQESKNVLSLTEELNQLLSEK--DNVLQ----EHQKMSDDLVLANKEIERLK 270 Query: 73 IYNETLRLNDVTVTRLSN 20 +E L ++ V +L+N Sbjct: 271 -KDEQLARAEIKVLQLAN 287 >AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA, isoform A protein. Length = 1916 Score = 27.1 bits (57), Expect = 9.0 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = -2 Query: 253 NQLLRLMCFSASFLTFSMA*KLTQICMQVSIDSFVR*KQYNHQKVKVLIVSATREIRRLK 74 NQ L+++ S S+ +L Q+ + D+ ++ HQK+ +V A +EI RLK Sbjct: 217 NQKLKVLLSQESKNVLSLTEELNQLLSEK--DNVLQ----EHQKMSDDLVLANKEIERLK 270 Query: 73 IYNETLRLNDVTVTRLSN 20 +E L ++ V +L+N Sbjct: 271 -KDEQLARAEIKVLQLAN 287 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,918,098 Number of Sequences: 53049 Number of extensions: 201075 Number of successful extensions: 323 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 323 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 323 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1128794130 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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