Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1022
         (395 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g23450.2 68418.m02752 diacylglycerol kinase family protein co...    27   4.5  
At5g23450.1 68418.m02751 diacylglycerol kinase family protein co...    27   4.5  
At4g23440.1 68417.m03379 expressed protein                             27   4.5  

>At5g23450.2 68418.m02752 diacylglycerol kinase family protein
           contains INTERPRO domain, IPR001206, DAG-kinase
           catalytic domain
          Length = 763

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 133 YIVSNERSYLCLPAYKFELTFTPSR 207
           Y V+    ++CLP Y +E+ + P++
Sbjct: 419 YFVAGFLKFMCLPKYSYEVEYLPAQ 443


>At5g23450.1 68418.m02751 diacylglycerol kinase family protein
           contains INTERPRO domain, IPR001206, DAG-kinase
           catalytic domain
          Length = 763

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 133 YIVSNERSYLCLPAYKFELTFTPSR 207
           Y V+    ++CLP Y +E+ + P++
Sbjct: 419 YFVAGFLKFMCLPKYSYEVEYLPAQ 443


>At4g23440.1 68417.m03379 expressed protein 
          Length = 964

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 85  GFRESQTQLKLLLFGDYIVSNERSYLCLPAYKFELTFTPSRTLKN 219
           G ++  ++L+ +LFGD    +ER Y       FEL   P+R  KN
Sbjct: 328 GRKKELSELEFVLFGDVAGDSERDY-------FELKARPTRRKKN 365


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,321,136
Number of Sequences: 28952
Number of extensions: 100397
Number of successful extensions: 170
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 565902384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)