Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1018
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.65 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.6  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 421 YYFIPFLIIATLTYFYTGNIXXXXXXXXXVIVAXLYL*VFF*KYIYY 561
           Y++  F+I+  + YFY   I         + +    + +FF   IYY
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYY 148


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 370 NDLKSLLGNLE 338
           NDLK+LL NLE
Sbjct: 133 NDLKTLLSNLE 143


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 370 NDLKSLLGNLE 338
           NDLK+LL NLE
Sbjct: 89  NDLKTLLSNLE 99


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 502 YIINYLAKCCQCKNTL 455
           +I+N L  C QC NT+
Sbjct: 279 FIVNVLYICNQCYNTV 294


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 236 QEINNRTNKLIYEHLHKPNRI 298
           Q+I  +T+  I++H H P ++
Sbjct: 94  QKIEQQTHSSIHQHHHDPMKM 114


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 108 PTTANMYCQHAVYISF 155
           P+TANM  Q  ++++F
Sbjct: 444 PSTANMVPQEGIHLTF 459


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 236 QEINNRTNKLIYEHLHKPNRI 298
           Q+I  +T+  I++H H P ++
Sbjct: 245 QKIEQQTHSSIHQHHHDPMKM 265


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 236 QEINNRTNKLIYEHLHKPNRI 298
           Q+I  +T+  I++H H P ++
Sbjct: 304 QKIEQQTHSSIHQHHHDPMKM 324


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 137 MLAIHVGRSWTTNMRFIYFME 75
           ++A++ G  WT  + F YF E
Sbjct: 124 LVALYSGYVWTDILGFGYFRE 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,143
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)