Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1018
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010317-1|AAQ23635.1|  956|Drosophila melanogaster AT05393p pro...    28   8.4  
BT001363-1|AAN71118.1|  538|Drosophila melanogaster AT29936p pro...    28   8.4  
AE014296-54|AAN11430.1|  538|Drosophila melanogaster CG17142-PB,...    28   8.4  
AE014296-53|AAF47356.2|  956|Drosophila melanogaster CG17142-PA,...    28   8.4  

>BT010317-1|AAQ23635.1|  956|Drosophila melanogaster AT05393p
           protein.
          Length = 956

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 447 CNTNVFLHWQHFAK*FII*LSYCSXTLFISIF 542
           C T +FL W+   K F++ L+Y   TLF+ +F
Sbjct: 478 CETFLFLKWRRIRKFFLMSLAY--HTLFVILF 507


>BT001363-1|AAN71118.1|  538|Drosophila melanogaster AT29936p
           protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 447 CNTNVFLHWQHFAK*FII*LSYCSXTLFISIF 542
           C T +FL W+   K F++ L+Y   TLF+ +F
Sbjct: 60  CETFLFLKWRRIRKFFLMSLAY--HTLFVILF 89


>AE014296-54|AAN11430.1|  538|Drosophila melanogaster CG17142-PB,
           isoform B protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 447 CNTNVFLHWQHFAK*FII*LSYCSXTLFISIF 542
           C T +FL W+   K F++ L+Y   TLF+ +F
Sbjct: 60  CETFLFLKWRRIRKFFLMSLAY--HTLFVILF 89


>AE014296-53|AAF47356.2|  956|Drosophila melanogaster CG17142-PA,
           isoform A protein.
          Length = 956

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 447 CNTNVFLHWQHFAK*FII*LSYCSXTLFISIF 542
           C T +FL W+   K F++ L+Y   TLF+ +F
Sbjct: 478 CETFLFLKWRRIRKFFLMSLAY--HTLFVILF 507


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,242,549
Number of Sequences: 53049
Number of extensions: 384549
Number of successful extensions: 766
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)