Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1017
(388 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 100 8e-21
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 82 3e-15
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 70 1e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 61 6e-09
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 60 1e-08
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 54 1e-06
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 52 3e-06
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 48 6e-05
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 47 1e-04
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 46 3e-04
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 42 0.003
UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1; ... 35 0.47
UniRef50_Q894R7 Cluster: Putative uncharacterized protein; n=2; ... 34 0.83
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 33 1.9
UniRef50_Q9Z8R8 Cluster: SuA5 Superfamily-related Protein; n=2; ... 33 2.5
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 33 2.5
UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;... 32 3.3
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 32 3.3
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 31 5.8
UniRef50_A6CU83 Cluster: RNA polymerase sigma factor Y; n=1; Bac... 31 5.8
UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza sativa... 31 5.8
UniRef50_A3BE21 Cluster: Putative uncharacterized protein; n=3; ... 31 5.8
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 5.8
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 100 bits (240), Expect = 8e-21
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +1
Query: 1 AKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYKL 180
AK+SAKQPQ LNNQVLFDK TYEKLYKEVP YKL
Sbjct: 7 AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKL 66
Query: 181 ITPAVVSERLKVRGSLARRALIELRKK 261
ITP+VVSERLK+RGSLA+RALIELR+K
Sbjct: 67 ITPSVVSERLKIRGSLAKRALIELREK 93
Score = 52.8 bits (121), Expect = 2e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRATKGDD 329
EKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 92 EKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 82.2 bits (194), Expect = 3e-15
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.089
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 258 KGLIKQVVQHHGQVIYTRATKGDDPVA 338
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 70.1 bits (164), Expect = 1e-11
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1
Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 252
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDL 210
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 61.3 bits (142), Expect = 6e-09
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +1
Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 252
L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L +L
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQL 83
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 60.5 bits (140), Expect = 1e-08
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +1
Query: 112 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKKASSNR 276
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L K+ R
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKR 91
Score = 37.1 bits (82), Expect = 0.12
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRAT 317
++GLIK+VV HH Q+IYTRAT
Sbjct: 85 KEGLIKRVVHHHAQLIYTRAT 105
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 53.6 bits (123), Expect = 1e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 109 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
LNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L KK
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKK 89
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +1
Query: 112 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL L ++
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQ 85
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 48.0 bits (109), Expect = 6e-05
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +1
Query: 121 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL L K+
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKE 86
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 139 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L+ K
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAK 60
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 45.6 bits (103), Expect = 3e-04
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 112 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKK 261
N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L + K
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESK 87
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 42.3 bits (95), Expect = 0.003
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELRK 258
LNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + K
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAK 153
>UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Putative
uncharacterized protein - Halorubrum lacusprofundi ATCC
49239
Length = 330
Score = 35.1 bits (77), Expect = 0.47
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRR 79
RR RP L+ RRRR+D V A+PR R
Sbjct: 93 RRARPRQLRPDRRRRRDAVGARPRPR 118
>UniRef50_Q894R7 Cluster: Putative uncharacterized protein; n=2;
Clostridium|Rep: Putative uncharacterized protein -
Clostridium tetani
Length = 579
Score = 34.3 bits (75), Expect = 0.83
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 275 LFDEAFFLSSMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTW 117
L D FF +S + N++D T L +L+++ Y G+ NNTW
Sbjct: 351 LIDNVFFYKFLSGNFFTKAEDLNINDATLKRSILLSRDTLFTWFYKGVDNNTW 403
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 258 KGLIKQVVQHHGQVIYTRATKGDD 329
KGLIK V +H +VIYTR TK D
Sbjct: 71 KGLIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_Q9Z8R8 Cluster: SuA5 Superfamily-related Protein; n=2;
Chlamydophila pneumoniae|Rep: SuA5 Superfamily-related
Protein - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 286
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 204 KVKGPRFPGEKSTHRT*EKGLIKQVVQHHGQVIYTRATKGDDPVA*T 344
K + PRFP E R + +++++V H G +I T A + P A T
Sbjct: 98 KHRNPRFPKETLAFRIVDHSVVREIVDHCGTLIGTSANLSEFPSALT 144
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 103 HELFLWTTSSSWLCRHRILPSSSVFFEAVW 14
H LF W++S S+ RHR LP +AVW
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW 76
>UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;
n=1; Catharanthus roseus|Rep: Receptor-like protein
kinase precursor - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle)
Length = 803
Score = 32.3 bits (70), Expect = 3.3
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -3
Query: 188 GVISLY-CGTSLYS-FSYVGLSNNTWLFNLSRTFPLD---HFFFLALPPPDPSFFFCVF 27
G S+Y GT L+S F N TWLFN+ F HF L P P+ +FFF VF
Sbjct: 258 GPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHFCNLLNPIPNNNFFFNVF 316
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 32.3 bits (70), Expect = 3.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 248 SMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL 69
S+S+ + FNL+ G+ ++ G+S +F+ +G+ + W F + P+D FL
Sbjct: 133 SLSSDIIGRRWAFNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFL 191
Query: 68 -ALP 60
ALP
Sbjct: 192 EALP 195
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.5 bits (68), Expect = 5.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 153 VQGSPTVQANHTCCRI*KVKGPRFPGEKSTHRT*EKGLIKQVVQHHGQVIYTRATKGDDP 332
V+ SPT+ + +C + + R + +GL K V +H QV+ TR TKG D
Sbjct: 28 VRKSPTIVCDSSC-GLQETGDSRVHAGAAPRELLSEGLSKLVSKHRAQVVDTRNTKGGDA 86
Query: 333 VA 338
A
Sbjct: 87 PA 88
>UniRef50_A6CU83 Cluster: RNA polymerase sigma factor Y; n=1;
Bacillus sp. SG-1|Rep: RNA polymerase sigma factor Y -
Bacillus sp. SG-1
Length = 186
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 142 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRKKASSN 273
++K Y+E+ + P+ V RL +L ++AL+E KK N
Sbjct: 141 HDKKYEEIQDILSLNPSTVKTRLLRGKNLLKKALVEAEKKEGEN 184
>UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza
sativa|Rep: Os06g0504100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 97
RR R HRRRR+ P+ PRRR P+ +
Sbjct: 149 RRQRLRLRSTHRRRRRPPLRPAPRRRRRPRPR 180
>UniRef50_A3BE21 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 614
Score = 31.5 bits (68), Expect = 5.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRR 76
R +RP+ ++ R+RR DPV +PRR
Sbjct: 463 RDVRPDGRRRQRQRRADPVRPRPRR 487
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.5 bits (68), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 137 GLSNNTWLFNLSRTFPLDHFFFLALPPPDPS 45
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,411,760
Number of Sequences: 1657284
Number of extensions: 7629347
Number of successful extensions: 24491
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24454
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -