Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1017
(388 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 27 0.18
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 25 1.3
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 24 1.7
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 24 2.2
CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein... 23 2.9
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 3.9
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 5.1
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 22 6.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 22 6.8
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 22 6.8
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 22 9.0
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 22 9.0
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 27.5 bits (58), Expect = 0.18
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 347 HSLCDWIIALGRTRVDHL-PMVLDYLF-DEAFFLSSMSALLAREPRTFNL 204
H LC W++A D L + Y DEAF + L R+P F L
Sbjct: 879 HGLCLWLVAEEELDRDKLYDAFVSYSHKDEAFITEHLVPTLERDPMNFKL 928
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 14 PNSLKKHRRRRKDPVAAKPRRR 79
P + ++HRRRR P RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 24.2 bits (50), Expect = 1.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRK 163
RRR+ +A RRR P+ + TTR P R T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 168 WDFLVQFLICGFIKQHLVVQL-VTNFS 91
W F VQF+ C I L++ + VT FS
Sbjct: 284 WVFFVQFIQCTMIWCSLILYIAVTGFS 310
>CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein
protein.
Length = 271
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 11 RPNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 109
+PN L++ K+PV KP+ P+ + VT+
Sbjct: 124 KPNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 251 LGKRPHQTGSPTP 289
LG+ P TG PTP
Sbjct: 1163 LGRTPSDTGGPTP 1175
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 6 GFGQTASKNTEEEGRIR 56
GFGQ + NT+ EG ++
Sbjct: 508 GFGQYCAANTDPEGAMK 524
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 318 WSHACRSPAHGVGL 277
+SH C SP G GL
Sbjct: 116 YSHGCMSPEQGGGL 129
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 22.2 bits (45), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 130 DKPTYEKLYKEVPQYKLITPAVVSERLKV 216
+ P+ + L KEVP K+ S LKV
Sbjct: 633 ETPSDQPLIKEVPMNKIQVGGAPSPNLKV 661
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 111 QLVTNFSFGP 82
Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 152 SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPPD 51
S + L++NT R +P ++ F AL P D
Sbjct: 1391 SLQGITLTDNTRQLFFRRHYPSNNVSFCALDPDD 1424
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 130 DKPTYEKLYKEVPQYKLITPAVVSERLKVR 219
DKPT +++ K +Y+ P +RLK +
Sbjct: 94 DKPTAQQVMKCWKKYRPENPIARVQRLKAK 123
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,711
Number of Sequences: 2352
Number of extensions: 8176
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -