Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1017
(388 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 100 6e-22
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 100 6e-22
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 100 6e-22
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 98 3e-21
AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p pro... 29 1.6
AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA... 29 1.6
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 28 4.9
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 28 4.9
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 28 4.9
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 28 4.9
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 27 6.4
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 6.4
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 6.4
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 27 6.4
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 100 bits (240), Expect = 6e-22
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +1
Query: 1 AKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYKL 180
AK+SAKQPQ LNNQVLFDK TYEKLYKEVP YKL
Sbjct: 7 AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKL 66
Query: 181 ITPAVVSERLKVRGSLARRALIELRKK 261
ITP+VVSERLK+RGSLA+RALIELR+K
Sbjct: 67 ITPSVVSERLKIRGSLAKRALIELREK 93
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRATKGDD 329
EKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 92 EKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 100 bits (240), Expect = 6e-22
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +1
Query: 1 AKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYKL 180
AK+SAKQPQ LNNQVLFDK TYEKLYKEVP YKL
Sbjct: 7 AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKL 66
Query: 181 ITPAVVSERLKVRGSLARRALIELRKK 261
ITP+VVSERLK+RGSLA+RALIELR+K
Sbjct: 67 ITPSVVSERLKIRGSLAKRALIELREK 93
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRATKGDD 329
EKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 92 EKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 100 bits (240), Expect = 6e-22
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +1
Query: 1 AKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYKL 180
AK+SAKQPQ LNNQVLFDK TYEKLYKEVP YKL
Sbjct: 7 AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKL 66
Query: 181 ITPAVVSERLKVRGSLARRALIELRKK 261
ITP+VVSERLK+RGSLA+RALIELR+K
Sbjct: 67 ITPSVVSERLKIRGSLAKRALIELREK 93
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRATKGDD 329
EKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 92 EKGLIKQVVQHHSQVIYTRATKGDE 116
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 98.3 bits (234), Expect = 3e-21
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1
Query: 1 AKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYKL 180
AK+SAKQPQ LNNQVLFDK TYEKLYKEVP YKL
Sbjct: 3 AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKL 62
Query: 181 ITPAVVSERLKVRGSLARRALIELRKK 261
ITP+VVSERLK+RGSL +RALIELR+K
Sbjct: 63 ITPSVVSERLKIRGSLDKRALIELREK 89
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 EKGLIKQVVQHHGQVIYTRATKGDD 329
EKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 88 EKGLIKQVVQHHSQVIYTRATKGDE 112
>AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p protein.
Length = 1858
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +2
Query: 218 EVPWREEHSSNLGKRP--HQTGSPTP 289
+VPW+++H + ++P H TG P+P
Sbjct: 1694 KVPWQQQHHQQIQQQPSAHTTGPPSP 1719
>AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA
protein.
Length = 2145
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +2
Query: 218 EVPWREEHSSNLGKRP--HQTGSPTP 289
+VPW+++H + ++P H TG P+P
Sbjct: 1981 KVPWQQQHHQQIQQQPSAHTTGPPSP 2006
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 88
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 88
R P+S + R R+ P++ PRRRS P
Sbjct: 84 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 88
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 2 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 88
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 248 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 129
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 131 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 42
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 131 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 42
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 248 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 129
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,320,407
Number of Sequences: 53049
Number of extensions: 358639
Number of successful extensions: 1048
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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