Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1016
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   0.47 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   7.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   7.6  

>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 0.47
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 364 KNMFIHIDLNNNMLIYL 314
           +N + H+DL NN++I L
Sbjct: 328 RNNYFHMDLENNVIIIL 344


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 133 DFPRTEPKKVEEK 171
           +FP T+PKK+  K
Sbjct: 148 EFPETKPKKIRGK 160


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 364 KNMFIHIDLNNNMLIY 317
           +N + H+DL NN+  Y
Sbjct: 328 RNNYFHMDLENNVQSY 343


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 298 LLMNALDILTYYYLSQCE 351
           LL +   +L Y Y S+CE
Sbjct: 156 LLEHCFSMLNYVYSSKCE 173


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 133 DFPRTEPKKVEEK 171
           +FP  +PKK+  K
Sbjct: 156 EFPENKPKKIRSK 168


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 143 LGKSSLDHEPGSPFFNFISTLVPNIE 66
           L  + + HEPG+ ++   + L  N E
Sbjct: 405 LPNTHMGHEPGAAYYQNENMLQKNAE 430


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 143 LGKSSLDHEPGSPFFNFISTLVPNIE 66
           L  + + HEPG+ ++   + L  N E
Sbjct: 353 LPNTHMGHEPGAAYYQNENMLQKNAE 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,108
Number of Sequences: 336
Number of extensions: 1837
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)