Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1016
         (394 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   1.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   7.0  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +1

Query: 28   ELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKS 174
            ++  + ++E    + L T   ++   G+P  W KL F    P KV   S
Sbjct: 995  DIGNIYDLEPELRAYLHTNTYVRW--GDPWFWDKLRFAMPHPPKVRGAS 1041


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 101  FNFISTLVPNIEAELLSILITPLSSRSNSKAA 6
            F  +STL+  IEA L S  IT +S   N   A
Sbjct: 1568 FEDLSTLLAEIEACLNSRPITAISEDPNDMEA 1599


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,550
Number of Sequences: 2352
Number of extensions: 6752
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)