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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1016
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108901-1|AAI08902.1|  329|Homo sapiens ITGB1BP2 protein protein.     59   4e-09
AF140690-1|AAF01676.1|  347|Homo sapiens melusin protein.              59   4e-09
AF110225-1|AAL36913.1|  347|Homo sapiens MSTP015 protein.              59   4e-09
BC072461-1|AAH72461.1|  332|Homo sapiens cysteine and histidine-...    52   9e-07
BC017789-1|AAH17789.1|  116|Homo sapiens CHORDC1 protein protein.      52   9e-07
AF192466-1|AAF18437.1|  332|Homo sapiens CHORD containing protei...    51   1e-06
AF123249-1|AAG43237.1|  313|Homo sapiens protein ( Homo sapiens ...    51   1e-06
BT009798-1|AAP88800.1|  333|Homo sapiens SGT1, suppressor of G2 ...    39   0.007
BC000911-1|AAH00911.1|  333|Homo sapiens SGT1, suppressor of G2 ...    39   0.007
AY321358-1|AAQ76039.1|  365|Homo sapiens SUGT1B protein.               39   0.007
AY271314-1|AAQ01749.1|  365|Homo sapiens SGT1B protein protein.        39   0.007
AL139089-2|CAI17072.1|  333|Homo sapiens SGT1, suppressor of G2 ...    39   0.007
AL139089-1|CAM23909.1|  365|Homo sapiens SGT1, suppressor of G2 ...    39   0.007
AJ344097-1|CAC51433.1|  333|Homo sapiens putative 40-6-3 protein...    39   0.007
AF132856-1|AAD30062.1|  333|Homo sapiens suppressor of G2 allele...    39   0.007
X86810-1|CAA60500.1|  254|Homo sapiens emerin protein.                 29   7.2  
X82434-1|CAA57817.1|  254|Homo sapiens emerin protein.                 29   7.2  
L44140-2|AAA92645.1|  254|Homo sapiens emerin protein.                 29   7.2  
D64111-1|BAA10972.1|  254|Homo sapiens emerin protein.                 29   7.2  
CR536536-1|CAG38773.1|  254|Homo sapiens EMD protein.                  29   7.2  
BX936346-5|CAI43228.1|  254|Homo sapiens emerin (Emery-Dreifuss ...    29   7.2  
BX936346-4|CAI43229.1|  219|Homo sapiens emerin (Emery-Dreifuss ...    29   7.2  
BT007401-1|AAP36065.1|  254|Homo sapiens emerin (Emery-Dreifuss ...    29   7.2  
BC000738-1|AAH00738.1|  254|Homo sapiens emerin (Emery-Dreifuss ...    29   7.2  

>BC108901-1|AAI08902.1|  329|Homo sapiens ITGB1BP2 protein protein.
          Length = 329

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTV 180
           G+  F+  ++L GVIN+E+SS  ++ ++VEI L K +PGSW++L+ P    KK      +
Sbjct: 242 GNRVFQAQMKLWGVINVEQSSVFLMPSRVEISLVKADPGSWAQLEHPDALAKKARAGVVL 301

Query: 181 QVNTMEDDSVD 213
           +++  E D  D
Sbjct: 302 EMDEEESDDSD 312


>AF140690-1|AAF01676.1|  347|Homo sapiens melusin protein.
          Length = 347

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTV 180
           G+  F+  ++L GVIN+E+SS  ++ ++VEI L K +PGSW++L+ P    KK      +
Sbjct: 260 GNRVFQAQMKLWGVINVEQSSVFLMPSRVEISLVKADPGSWAQLEHPDALAKKARAGVVL 319

Query: 181 QVNTMEDDSVD 213
           +++  E D  D
Sbjct: 320 EMDEEESDDSD 330


>AF110225-1|AAL36913.1|  347|Homo sapiens MSTP015 protein.
          Length = 347

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKSTV 180
           G+  F+  ++L GVIN+E+SS  ++ ++VEI L K +PGSW++L+ P    KK      +
Sbjct: 260 GNRVFQAQMKLWGVINVEQSSVFLMPSRVEISLVKADPGSWAQLEHPDALAKKARAGVVL 319

Query: 181 QVNTMEDDSVD 213
           +++  E D  D
Sbjct: 320 EMDEEESDDSD 330


>BC072461-1|AAH72461.1|  332|Homo sapiens cysteine and
           histidine-rich domain (CHORD)-containing 1 protein.
          Length = 332

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 20/59 (33%), Positives = 40/59 (67%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKST 177
           G+  F+ +++L GVI+++RS  +M  TK+EI ++K EP  W+ L+ P  + ++ ++ +T
Sbjct: 272 GEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDAT 330


>BC017789-1|AAH17789.1|  116|Homo sapiens CHORDC1 protein protein.
          Length = 116

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 20/59 (33%), Positives = 40/59 (67%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKST 177
           G+  F+ +++L GVI+++RS  +M  TK+EI ++K EP  W+ L+ P  + ++ ++ +T
Sbjct: 56  GEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDAT 114


>AF192466-1|AAF18437.1|  332|Homo sapiens CHORD containing protein-1
           protein.
          Length = 332

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 20/59 (33%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKST 177
           G+  F+ +++L GVI+++RS  +M  TK+EI ++K EP  W+ L+ P  + ++ ++  T
Sbjct: 272 GEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDDT 330


>AF123249-1|AAG43237.1|  313|Homo sapiens protein ( Homo sapiens
           chymotrypsin-like protein mRNA, complete cds. ).
          Length = 313

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 20/59 (33%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GDAAFELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLDFPRTEPKKVEEKST 177
           G+  F+ +++L GVI+++RS  +M  TK+EI ++K EP  W+ L+ P  + ++ ++  T
Sbjct: 253 GEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDDT 311


>BT009798-1|AAP88800.1|  333|Homo sapiens SGT1, suppressor of G2
           allele of SKP1 (S. cerevisiae) protein.
          Length = 333

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 186 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226


>BC000911-1|AAH00911.1|  333|Homo sapiens SGT1, suppressor of G2
           allele of SKP1 (S. cerevisiae) protein.
          Length = 333

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 186 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226


>AY321358-1|AAQ76039.1|  365|Homo sapiens SUGT1B protein.
          Length = 365

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 218 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 258


>AY271314-1|AAQ01749.1|  365|Homo sapiens SGT1B protein protein.
          Length = 365

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 218 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 258


>AL139089-2|CAI17072.1|  333|Homo sapiens SGT1, suppressor of G2
           allele of SKP1 (S. cerevisiae) protein.
          Length = 333

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 186 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226


>AL139089-1|CAM23909.1|  365|Homo sapiens SGT1, suppressor of G2
           allele of SKP1 (S. cerevisiae) protein.
          Length = 365

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 218 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 258


>AJ344097-1|CAC51433.1|  333|Homo sapiens putative 40-6-3 protein
           protein.
          Length = 333

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 186 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226


>AF132856-1|AAD30062.1|  333|Homo sapiens suppressor of G2 allele of
           skp1 homolog protein.
          Length = 333

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +1

Query: 13  FELDLELRGVINIERSSASMLGTKVEIKLKKGEPGSWSKLD 135
           + L LEL   I  E+S+  +L TK+EIKLKK E   W KL+
Sbjct: 186 YNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226


>X86810-1|CAA60500.1|  254|Homo sapiens emerin protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>X82434-1|CAA57817.1|  254|Homo sapiens emerin protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>L44140-2|AAA92645.1|  254|Homo sapiens emerin protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>D64111-1|BAA10972.1|  254|Homo sapiens emerin protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>CR536536-1|CAG38773.1|  254|Homo sapiens EMD protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>BX936346-5|CAI43228.1|  254|Homo sapiens emerin (Emery-Dreifuss
           muscular dystrophy) protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>BX936346-4|CAI43229.1|  219|Homo sapiens emerin (Emery-Dreifuss
           muscular dystrophy) protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 105 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 163


>BT007401-1|AAP36065.1|  254|Homo sapiens emerin (Emery-Dreifuss
           muscular dystrophy) protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


>BC000738-1|AAH00738.1|  254|Homo sapiens emerin (Emery-Dreifuss
           muscular dystrophy) protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 305 ISKMSQNCISREKPILGMLTLFNVIVSTELRSTESSSIVLTWTVDFSSTFFGSVLGKSS 129
           +S   + C  RE+P+ G  + +  I      S   SS+ L++    SST F S    SS
Sbjct: 140 LSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSS 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,827,084
Number of Sequences: 237096
Number of extensions: 1011774
Number of successful extensions: 2109
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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