Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1015X
         (273 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   5.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    19   7.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    19   7.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    19   7.2  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 232 SSLYECSAGGKF 197
           SSLY C AG +F
Sbjct: 241 SSLYTCIAGYEF 252


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 94  REIYEPIEEIIFHE 53
           RE+YE I ++  HE
Sbjct: 82  REVYESIFKVEVHE 95


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 94  REIYEPIEEIIFHE 53
           RE+YE I ++  HE
Sbjct: 242 REVYESIFKVEVHE 255


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 94  REIYEPIEEIIFHE 53
           RE+YE I ++  HE
Sbjct: 242 REVYESIFKVEVHE 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,793
Number of Sequences: 336
Number of extensions: 522
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4471194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)