Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1014
         (663 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DIS7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_Q7RG44 Cluster: Putative uncharacterized protein PY0450...    33   6.1  

>UniRef50_A2DIS7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1069

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 270 IFQFNGTNRLANVLEIYS---IIVDTALVVRDFKT*IISMFIINYVNFLLKADIHKSGDI 100
           IF F+  N     L  ++   II D  +V++   T IIS+F  N  + +   +I+  G+I
Sbjct: 441 IFHFSHQNEKVTSLSSHTSSAIINDKFIVIKKSDT-IISLFSHNEESIIFLKEINIEGEI 499

Query: 99  CTVNLLLD 76
           CT N + D
Sbjct: 500 CTFNFIYD 507


>UniRef50_Q7RG44 Cluster: Putative uncharacterized protein PY04506;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY04506 - Plasmodium yoelii
           yoelii
          Length = 544

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 318 ILFSYITFHYFFFKLSIFQFNGTNRLANVLEIYSIIVDTALVV 190
           I F  +TF   FF  S+F     N   N L+IYS I+ ++ ++
Sbjct: 333 IEFFILTFSNCFFMFSLFDIYENNVFGNTLDIYSYILPSSFII 375


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,783,851
Number of Sequences: 1657284
Number of extensions: 7211361
Number of successful extensions: 13667
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13661
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)