Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1014
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.55 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.55 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 267 FQFNGTNRLANVLEIYSIIVDTALVVRDFKT*IISMFIINYVNF 136
           + F G +    V+ IYSI V T   V DF       +  NY++F
Sbjct: 118 YAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHF 161


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -1

Query: 327 YYKILFSYIT----FHYFFFKLSIFQFNGTNRLANVLEIYSIIVDTALVVRDFKT*IISM 160
           Y+ +++S +        +++ L+   +N TNR    L +  + +    +  +F T  +  
Sbjct: 22  YFSVIYSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWLNVCCLNLSIVTIFFNFATKKLEQ 81

Query: 159 FIINYVNF 136
           FI+ ++ +
Sbjct: 82  FIVRFMKY 89


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 339 FQLNYYKILFSYITFH 292
           FQL YY++  + I FH
Sbjct: 157 FQLKYYQVTGTPIIFH 172


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 339 FQLNYYKILFSYITFH 292
           FQL YY++  + I FH
Sbjct: 157 FQLKYYQVTGTPIIFH 172


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 318 ILFSYITFHYFFFKLSIFQFNGTNRL 241
           +LF+    HY   KL+ FQ  GT+ +
Sbjct: 230 VLFTSEDAHYSIKKLASFQGIGTDNV 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,790
Number of Sequences: 336
Number of extensions: 2091
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)