Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1012X
         (466 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q98S14 Cluster: Putative uncharacterized protein orf201...    33   3.1  
UniRef50_Q5UQW3 Cluster: Uncharacterized protein L374; n=1; Acan...    33   3.1  
UniRef50_A7FT39 Cluster: ABC transporter, permease protein; n=4;...    33   4.1  
UniRef50_Q8II19 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_A2DF57 Cluster: Putative uncharacterized protein; n=1; ...    32   5.4  
UniRef50_UPI00015B44DB Cluster: PREDICTED: similar to CG15744-PA...    32   7.1  
UniRef50_Q81ZB3 Cluster: Putative uncharacterized protein; n=10;...    32   7.1  
UniRef50_UPI00006CD9DE Cluster: hypothetical protein TTHERM_0039...    31   9.4  
UniRef50_Q4YR82 Cluster: Putative uncharacterized protein; n=2; ...    31   9.4  

>UniRef50_Q98S14 Cluster: Putative uncharacterized protein orf201;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf201 - Guillardia theta (Cryptomonas phi)
          Length = 201

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 200 YIQHSILIKKCFSFFLSNAKIHYIRWVHTSSVVAPVLRTNDLVVLSYNGLVIDMIYTYIY 379
           Y + ++ +KK    FL+N +I Y  WV   ++      TN+  V  +N L +   YT IY
Sbjct: 40  YNESNLKLKKLKFVFLNNLEIEYPLWVFNKNI------TNNYFVNIFNFLSVSPYYTIIY 93

Query: 380 ICLHL 394
              +L
Sbjct: 94  DIFYL 98


>UniRef50_Q5UQW3 Cluster: Uncharacterized protein L374; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L374 - Mimivirus
          Length = 225

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 353 LQGHYTTTRPNHLFSTLELLH-----WMYEPNEYNEFWH*KERKKNI 228
           L GH +T R +   + + LLH     W YE N +N  W+ K+ K  +
Sbjct: 87  LMGHRSTYRRDEFINMMNLLHCQYEIWDYEDNYFNSNWNLKQLKNQL 133


>UniRef50_A7FT39 Cluster: ABC transporter, permease protein; n=4;
           Clostridium botulinum|Rep: ABC transporter, permease
           protein - Clostridium botulinum (strain ATCC 19397 /
           Type A)
          Length = 562

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -3

Query: 449 Y*YKLQSIETFVAQIFTYVNANIYIYMYISYRLQGHYTTTRPNHLFSTLELLHWMYEPN 273
           Y YK++ +   + ++ TY+   I I  YIS  L    T  + N +F TL+ +  +Y  N
Sbjct: 291 YEYKIKGVSAIILKVITYLFLLIMIMQYISIFLSA-ITKYKFNKMFFTLDNIRRIYNYN 348


>UniRef50_Q8II19 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1697

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 392 NANIYIYMYISYRLQGHYTTTRPNHLFSTLELLHWMYEP-NEYNEFWH*KER-KKN 231
           N N Y Y+ + Y     Y TTR   +F    + H+ Y+P NE+N  +   E  KKN
Sbjct: 261 NFNFYFYILLLYYYIYIYNTTRKIKIFDQGLIHHYEYKPLNEFNTIYKNYENLKKN 316


>UniRef50_A2DF57 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 418

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 382 YIYICIYHIDYKAIIRQHDQIICSQHWSYYTGCMNPTNIMNFG-IRKKERKTFLNQNTML 206
           Y+Y CIYH++  +++  H + +  ++W +    M    I  FG  R  +   F+N  T +
Sbjct: 222 YMYKCIYHVESSSLLECHFR-LKFENWDFIQTKMLFVVISQFGTTRSVDGMQFINCRTDV 280

Query: 205 YIYKDFCHNTNLNF 164
              K    N   NF
Sbjct: 281 PKQKQIIPNDKWNF 294


>UniRef50_UPI00015B44DB Cluster: PREDICTED: similar to CG15744-PA;
            n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
            CG15744-PA - Nasonia vitripennis
          Length = 1817

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
 Frame = -1

Query: 202  IYKDFCHNTNLNF*SKSRTHFIVFI--RFFNSKTQIGFVQNALLNVFLM*INNINST*AK 29
            +Y D+    N+N+ ++  +  + ++  R+ N + ++  V+N LLN  ++ IN +N     
Sbjct: 1706 LYTDYPGTENVNWKTRGYSTLLDYLIKRYPNPQEELPVVKNTLLNSEVVKINYLNRNEGL 1765

Query: 28   PHL*STRNK 2
            P L +T+N+
Sbjct: 1766 PILITTKNR 1774


>UniRef50_Q81ZB3 Cluster: Putative uncharacterized protein; n=10;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus anthracis
          Length = 222

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 388 QTYIYICIYHIDYKAIIRQHDQII 317
           Q Y+YI +YH+ Y  I+R +D+ I
Sbjct: 40  QDYVYISLYHVQYYKILRTYDEEI 63


>UniRef50_UPI00006CD9DE Cluster: hypothetical protein
           TTHERM_00398100; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00398100 - Tetrahymena
           thermophila SB210
          Length = 1104

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 26/106 (24%), Positives = 39/106 (36%)
 Frame = -1

Query: 379 IYICIYHIDYKAIIRQHDQIICSQHWSYYTGCMNPTNIMNFGIRKKERKTFLNQNTMLYI 200
           IY     +  K +I    QI  +  W      + P  + NF   + +R       T +Y 
Sbjct: 495 IYTVSAQLQSKYLIYNQTQIQYNTVWEKKNITLQPCTVQNFKNPENQRYYLALNYTNMYC 554

Query: 199 YKDFCHNTNLNF*SKSRTHFIVFIRFFNSKTQIGFVQNALLNVFLM 62
                  TN+N      +     I+FF SK QI       +N +LM
Sbjct: 555 LPP---KTNINIQGDFNSPVFQQIQFFVSKCQINCKSEEEINYYLM 597


>UniRef50_Q4YR82 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 287

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -1

Query: 376 YICIYHIDYKAIIRQHDQIICSQHWSYYTGCMNPTNIMNFGIRKKERKTFLNQNTMLYIY 197
           YI ++H D      +H  I C   W++Y    N      +GI        L QN +LYIY
Sbjct: 17  YIFLHHFDININFWKHINIEC---WNFY----NVIKHFFYGILVNSINENLFQNIILYIY 69

Query: 196 KDF 188
           K++
Sbjct: 70  KEY 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,813,923
Number of Sequences: 1657284
Number of extensions: 8470912
Number of successful extensions: 22439
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22249
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)