Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1012X
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   2.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 367 IYHIDYKAIIRQHDQIICSQHWSYYTGCMN-PTNIMNFGIRKKER 236
           I H DY+A + Q  QI   +   Y   C    T++MN  +R++ R
Sbjct: 142 IEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNL-LREQSR 185


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 263 HYIRWVHTSSV--VAPVLRTNDLVVLSYNGLVIDMIYTYIYICL 388
           HY+  +  S +  +AP+   N  V  S  G+V  + Y  I+I L
Sbjct: 9   HYVPIILLSKILGIAPISYKNSNVNYSKIGIVQTVAYFVIFIIL 52


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 347 GHYTTTRPNHLFSTLELLHWMYEPNE 270
           G YTT  PN +    E  H  Y P++
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDK 928


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 320 HLFSTLELLHWMYEPNEYN 264
           +  + L+++ WM  P E N
Sbjct: 445 YFVTNLQVIQWMQNPTELN 463


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 320 HLFSTLELLHWMYEPNEYN 264
           +  + L+++ WM  P E N
Sbjct: 452 YFVTNLQVIQWMQNPTELN 470


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 256 QNSLYSLGSYIQCSSSSVENK*FGRVV 336
           QNS YS  S   CS  + +   +  VV
Sbjct: 85  QNSNYSSNSKPDCSKGNADQNGYASVV 111


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 149 PRF*LKI*VCVVTKIFIYIQHSILIK 226
           P+F  K  +CVV+ +  Y++ + L++
Sbjct: 218 PKFKKKPLLCVVSTLSCYLERTELLR 243


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 179 VVTKIFIYIQHSILIKKCFSF 241
           V ++ F  I +SILIKK  SF
Sbjct: 296 VASEDFKAIWYSILIKKADSF 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,706
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)