Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1012X
         (466 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p pro...    28   5.4  
AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA ...    28   5.4  
U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.        27   9.4  
BT023890-1|ABA81824.1|  266|Drosophila melanogaster LP23252p pro...    27   9.4  
AY122246-1|AAM52758.1| 1124|Drosophila melanogaster SD03724p pro...    27   9.4  
AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA...    27   9.4  

>BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p
           protein.
          Length = 755

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 KIFIYIQHSILIKKCFSFFLSNAKIHYIR 274
           K FI   H  ++    S FLS  K+HYIR
Sbjct: 536 KKFIIFAHHRVMMDAISDFLSGLKVHYIR 564


>AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA
           protein.
          Length = 755

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 KIFIYIQHSILIKKCFSFFLSNAKIHYIR 274
           K FI   H  ++    S FLS  K+HYIR
Sbjct: 536 KKFIIFAHHRVMMDAISDFLSGLKVHYIR 564


>U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.
          Length = 2210

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 196 KDFCHNTNLNF*SKSRTHFIVFIRFFNSKTQI 101
           K F HN +LN  SK  T   +    FNS+ +I
Sbjct: 595 KSFSHNKSLNIDSKLLTEIEIITSTFNSRCRI 626


>BT023890-1|ABA81824.1|  266|Drosophila melanogaster LP23252p
           protein.
          Length = 266

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 197 IYIQHSILIKKCFSFFLSNAKIHYIRWVHTSSVVAPVL 310
           IY  H++  K   +FFL  AK+    W  T+S ++P +
Sbjct: 199 IYAGHNLANKAPETFFLLYAKVFIALWSGTASRLSPTI 236


>AY122246-1|AAM52758.1| 1124|Drosophila melanogaster SD03724p
           protein.
          Length = 1124

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 196 KDFCHNTNLNF*SKSRTHFIVFIRFFNSKTQI 101
           K F HN +LN  SK  T   +    FNS+ +I
Sbjct: 611 KSFSHNKSLNIDSKLLTEIEIITSTFNSRCRI 642


>AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA
           protein.
          Length = 2217

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 196 KDFCHNTNLNF*SKSRTHFIVFIRFFNSKTQI 101
           K F HN +LN  SK  T   +    FNS+ +I
Sbjct: 602 KSFSHNKSLNIDSKLLTEIEIITSTFNSRCRI 633


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,707,842
Number of Sequences: 53049
Number of extensions: 381593
Number of successful extensions: 1029
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)