Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1011
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029396-1|ABK56982.1|  167|Drosophila melanogaster IP01952p pro...   112   6e-25
BT024442-1|ABC86504.1|  167|Drosophila melanogaster IP01949p pro...   112   6e-25
AE014298-2040|AAF48377.1|  167|Drosophila melanogaster CG14413-P...   112   6e-25
D13964-1|BAA03067.2|  917|Drosophila melanogaster alpha-catenin ...    30   4.0  
AY051780-1|AAK93204.1|  917|Drosophila melanogaster LD30423p pro...    30   4.0  
AE014296-3768|AAF45466.1|  917|Drosophila melanogaster CG17947-P...    30   4.0  
BT024307-1|ABC86369.1|  529|Drosophila melanogaster IP11908p pro...    29   9.2  
AE014296-997|AAF50749.2|  518|Drosophila melanogaster CG10575-PA...    29   9.2  

>BT029396-1|ABK56982.1|  167|Drosophila melanogaster IP01952p
           protein.
          Length = 167

 Score =  112 bits (269), Expect = 6e-25
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXDNPA 434
           KN+TPSPF++CY DDGR +LID+D++++ DI++HL+  VGK+              DNPA
Sbjct: 69  KNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESKDNPA 128

Query: 435 NFGVGCDRSCMCEVFGQVPCSGVVP 509
           NFG GC R C+CE+ GQVPC G VP
Sbjct: 129 NFGYGCGRHCICEIPGQVPCPGTVP 153



 Score =  111 bits (268), Expect = 8e-25
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = +1

Query: 52  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 231
           MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN  G ++ G ++F FW +PQIQ+KN
Sbjct: 1   MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60

Query: 232 PDVQIVTLK 258
           P+VQ++TLK
Sbjct: 61  PEVQVLTLK 69


>BT024442-1|ABC86504.1|  167|Drosophila melanogaster IP01949p
           protein.
          Length = 167

 Score =  112 bits (269), Expect = 6e-25
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXDNPA 434
           KN+TPSPF++CY DDGR +LID+D++++ DI++HL+  VGK+              DNPA
Sbjct: 69  KNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESKDNPA 128

Query: 435 NFGVGCDRSCMCEVFGQVPCSGVVP 509
           NFG GC R C+CE+ GQVPC G VP
Sbjct: 129 NFGYGCGRHCICEIPGQVPCPGTVP 153



 Score =  111 bits (268), Expect = 8e-25
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = +1

Query: 52  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 231
           MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN  G ++ G ++F FW +PQIQ+KN
Sbjct: 1   MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60

Query: 232 PDVQIVTLK 258
           P+VQ++TLK
Sbjct: 61  PEVQVLTLK 69


>AE014298-2040|AAF48377.1|  167|Drosophila melanogaster CG14413-PA
           protein.
          Length = 167

 Score =  112 bits (269), Expect = 6e-25
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXDNPA 434
           KN+TPSPF++CY DDGR +LID+D++++ DI++HL+  VGK+              DNPA
Sbjct: 69  KNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESKDNPA 128

Query: 435 NFGVGCDRSCMCEVFGQVPCSGVVP 509
           NFG GC R C+CE+ GQVPC G VP
Sbjct: 129 NFGYGCGRHCICEIPGQVPCPGTVP 153



 Score =  111 bits (268), Expect = 8e-25
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = +1

Query: 52  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 231
           MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN  G ++ G ++F FW +PQIQ+KN
Sbjct: 1   MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60

Query: 232 PDVQIVTLK 258
           P+VQ++TLK
Sbjct: 61  PEVQVLTLK 69


>D13964-1|BAA03067.2|  917|Drosophila melanogaster alpha-catenin
           protein.
          Length = 917

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 58  FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQIQYKNP 234
           F +GR P++ T++ +NA K + +   K+  +   I  Q     TK+    YL +I     
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCH 801

Query: 235 DVQIVT 252
            +QI +
Sbjct: 802 QIQITS 807


>AY051780-1|AAK93204.1|  917|Drosophila melanogaster LD30423p
           protein.
          Length = 917

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 58  FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQIQYKNP 234
           F +GR P++ T++ +NA K + +   K+  +   I  Q     TK+    YL +I     
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCH 801

Query: 235 DVQIVT 252
            +QI +
Sbjct: 802 QIQITS 807


>AE014296-3768|AAF45466.1|  917|Drosophila melanogaster CG17947-PA
           protein.
          Length = 917

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 58  FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQIQYKNP 234
           F +GR P++ T++ +NA K + +   K+  +   I  Q     TK+    YL +I     
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCH 801

Query: 235 DVQIVT 252
            +QI +
Sbjct: 802 QIQITS 807


>BT024307-1|ABC86369.1|  529|Drosophila melanogaster IP11908p
           protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 18  FVLPVI*INIQNAVHERK-SAYKTHIELLKCREASPE 125
           FV+ ++  N+ + +HE K S+  T I+LL  R   PE
Sbjct: 277 FVIDIVESNVHDGIHETKVSSSNTRIDLLGTRWRRPE 313


>AE014296-997|AAF50749.2|  518|Drosophila melanogaster CG10575-PA
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 18  FVLPVI*INIQNAVHERK-SAYKTHIELLKCREASPE 125
           FV+ ++  N+ + +HE K S+  T I+LL  R   PE
Sbjct: 266 FVIDIVESNVHDGIHETKVSSSNTRIDLLGTRWRRPE 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,051,269
Number of Sequences: 53049
Number of extensions: 644903
Number of successful extensions: 1294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)