Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1010
         (457 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q3X2 Cluster: ENSANGP00000011718; n=4; Endopterygota|...    77   1e-13
UniRef50_UPI00003C03B7 Cluster: PREDICTED: similar to 7B2 CG1168...    49   4e-05
UniRef50_UPI00015B6114 Cluster: PREDICTED: similar to ENSANGP000...    46   4e-04
UniRef50_UPI0000DA1B36 Cluster: PREDICTED: hypothetical protein;...    33   2.9  
UniRef50_Q10NE5 Cluster: Retrotransposon protein, putative, uncl...    33   3.8  
UniRef50_UPI000155BC1E Cluster: PREDICTED: hypothetical protein;...    32   6.7  
UniRef50_Q82XA9 Cluster: Bacterial sugar transferase; n=3; Nitro...    32   6.7  
UniRef50_Q0F098 Cluster: ISGsu1, transposase; n=6; Mariprofundus...    32   6.7  
UniRef50_Q6AIS8 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  
UniRef50_Q1PCG3 Cluster: Polyketide synthase I protein; n=1; Str...    31   8.9  

>UniRef50_Q7Q3X2 Cluster: ENSANGP00000011718; n=4;
           Endopterygota|Rep: ENSANGP00000011718 - Anopheles
           gambiae str. PEST
          Length = 248

 Score = 77.4 bits (182), Expect = 1e-13
 Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
 Frame = +2

Query: 236 KGSFNNETLLREVVERMGKDFNDAASSYLE--FPXS*PPSR--LMAHASKDLENEQLDYD 403
           K  F ++ LLRE+V+RMGKD  +AA SY++       P SR  LMA  +KDLE+EQLDYD
Sbjct: 25  KDQFLSDMLLRELVDRMGKDLAEAADSYIDPSAMDELPASRLALMARVTKDLESEQLDYD 84

Query: 404 SLID-XNPXPSLCDQEYLQ 457
           +L+D  NP PS  DQEYLQ
Sbjct: 85  ALLDGSNPNPSPRDQEYLQ 103


>UniRef50_UPI00003C03B7 Cluster: PREDICTED: similar to 7B2
           CG1168-PA, isoform A isoform 1; n=1; Apis mellifera|Rep:
           PREDICTED: similar to 7B2 CG1168-PA, isoform A isoform 1
           - Apis mellifera
          Length = 227

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = +2

Query: 254 ETLLREVVERMGKDFNDAASSYLEFPXS*PPSRLMAHASKDLENE-QLDYDSLIDXNPXP 430
           +TLLRE++ +MG +  D A SYLE+              K++  E   DYDS+   NP P
Sbjct: 31  DTLLRELINQMGNELIDTADSYLEYQDK----------PKEIPLELPTDYDSMDTLNPNP 80

Query: 431 SLCDQEYLQ 457
           S+ DQEYLQ
Sbjct: 81  SIRDQEYLQ 89


>UniRef50_UPI00015B6114 Cluster: PREDICTED: similar to
           ENSANGP00000011718; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000011718 - Nasonia
           vitripennis
          Length = 285

 Score = 46.0 bits (104), Expect = 4e-04
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 245 FNNETLLREVVERMGKDFNDAAS-SYLEFPXS*PPSRLMAHASKDLENEQ-LDYDSLIDX 418
           F +  LLR+++ERMG +  DAA  +YL+   S   S +     K++  E  +DY+++   
Sbjct: 68  FMSNMLLRDLIERMGSELADAAGDNYLDERES-ASSGMRGLPDKEIPLEMPIDYEAIDAI 126

Query: 419 NPXPSLCDQEYLQ 457
           NP  S+ DQEYLQ
Sbjct: 127 NPKASIRDQEYLQ 139


>UniRef50_UPI0000DA1B36 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 242

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 31/89 (34%), Positives = 41/89 (46%)
 Frame = +1

Query: 181 WR*TPSQPWALSPMVLLGQRII**RNFAS*SSRAYGQRLQRRGVQLPRVPGQLTAISPDG 360
           WR  P  P   S   ++G R+      A+      GQR  + G Q   VPG  +A  P  
Sbjct: 58  WRPRPVAPPRASCRDVVGSRV------AAAGGAELGQRPGKGGGQ---VPG--SAAGPHW 106

Query: 361 AREQGPGERAARLRLVDRXEPXPQSVRPR 447
           AR +G G+  ARLR+ +   P P  V PR
Sbjct: 107 ARTRGDGD--ARLRVCNARAPRPVCVSPR 133


>UniRef50_Q10NE5 Cluster: Retrotransposon protein, putative,
            unclassified; n=7; Oryza sativa (japonica
            cultivar-group)|Rep: Retrotransposon protein, putative,
            unclassified - Oryza sativa subsp. japonica (Rice)
          Length = 2111

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +1

Query: 319  PRVPGQLTAISPDGAREQGPGERAARLRLVDRXEPXPQSVRPRV 450
            PR P    + S DG  E  PG  +  LRL       P   RPRV
Sbjct: 1696 PRSPSPAASDSDDGGNEDEPGSESNPLRLYKTRAVDPDPKRPRV 1739


>UniRef50_UPI000155BC1E Cluster: PREDICTED: hypothetical protein;
           n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein - Ornithorhynchus anatinus
          Length = 285

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 PGQLTAISPDGAREQGPGERAARLRLVDRXEPXPQSVRPR 447
           P     ISP   R++ PG RA+R R   R  P P   RPR
Sbjct: 104 PAPAPLISPPATRQE-PGPRASRGRSRRRGSPSPDGCRPR 142


>UniRef50_Q82XA9 Cluster: Bacterial sugar transferase; n=3;
           Nitrosomonadaceae|Rep: Bacterial sugar transferase -
           Nitrosomonas europaea
          Length = 429

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +2

Query: 191 HRRSHGLYPPWFYWGKGSFNNETLLREVVERM 286
           H R   LYP W  +G G FN  T LR VV+RM
Sbjct: 213 HLRMDSLYPSWLVFGSG-FNQGT-LRTVVKRM 242


>UniRef50_Q0F098 Cluster: ISGsu1, transposase; n=6; Mariprofundus
           ferrooxydans PV-1|Rep: ISGsu1, transposase -
           Mariprofundus ferrooxydans PV-1
          Length = 383

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 146 HLRNGPVRHATFGDKH-RRSHGLYPPWFYWGKGSFNNETLLREVVERM 286
           HL  G VR +T  D + +RS G+Y   FYW    F  + + R+   R+
Sbjct: 72  HLGAGSVRRSTLADANVKRSAGMYLELFYWLLHQFRGKGIHRKDAVRL 119


>UniRef50_Q6AIS8 Cluster: Putative uncharacterized protein; n=2;
           delta/epsilon subdivisions|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 550

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 212 YPPWFYWGKGSFNNETLLREVVERMGKDFNDAASSYLEF 328
           Y PW Y G+G       L  ++++MGK+      SYL+F
Sbjct: 328 YTPWDYKGEGCEAELKYLTAILDKMGKEIYLREYSYLDF 366


>UniRef50_Q1PCG3 Cluster: Polyketide synthase I protein; n=1;
            Streptomyces sp. 98-62|Rep: Polyketide synthase I protein
            - Streptomyces sp. 98-62
          Length = 1605

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 295  LQRRGVQLPRVPGQLTAISPDGARE---QGPGERAARLRLVDRXEPXPQSVRPRVLA 456
            L+RRG  +P V   L  ++   ARE   +G GER A L   D      ++VR  V A
Sbjct: 1405 LRRRGDDVPPVLRTLAGVTAPAAREDRTRGLGERLAALPAADHEHTVLEAVRTEVAA 1461


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,026,835
Number of Sequences: 1657284
Number of extensions: 8638418
Number of successful extensions: 19744
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19731
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)