Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1009
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.5  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 382 KKSHLFKNCNTVGPYNLWMGYDDDDNSSSAMS 477
           K ++ F+  +  G    W+GY+D D + +  S
Sbjct: 361 KGTYAFRTPDENGEGGAWVGYEDPDTAGNKAS 392


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 530 PFLLTLPIF-SGLTAMTSQYGASPCAF 607
           P  L++P+  SGL AM   Y    C+F
Sbjct: 165 PINLSVPVLLSGLIAMCGMYYRDECSF 191



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 200 KKIWTATKKMYLLFSSNFLHNHE 268
           KK W+    MY L    +L N E
Sbjct: 434 KKRWSQCMYMYFLLGFRYLVNDE 456


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 530 PFLLTLPIF-SGLTAMTSQYGASPCAF 607
           P  L++P+  SGL AM   Y    C+F
Sbjct: 398 PINLSVPVLLSGLIAMCGMYYRDECSF 424


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 530 PFLLTLPIF-SGLTAMTSQYGASPCAF 607
           P  L++P+  SGL AM   Y    C+F
Sbjct: 398 PINLSVPVLLSGLIAMCGMYYRDECSF 424


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 382 KKSHLFKNCNTVGPYNLWMGYDDDDNS 462
           K S++F+  +       W+GY+D D +
Sbjct: 369 KGSYIFRLPDENNNGGFWVGYEDTDTA 395


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 413  VLQFLNRWDF 384
            VLQFL +W+F
Sbjct: 1503 VLQFLEKWNF 1512


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 465 QCYEWNRKTRIFGL 506
           QCY    ++RIFGL
Sbjct: 289 QCYNTVEESRIFGL 302


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 233 DTFFLLLSIFFYRSLDSSRS 174
           DTF +LLS+ F   +  SR+
Sbjct: 539 DTFIILLSMAFATRMKQSRT 558


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 137 LYVCSEAILDSEW 99
           +Y+ +E++LD +W
Sbjct: 162 MYINTESVLDGDW 174


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 427 NLWMGYDDDDNSSSAMS 477
           N W+G+DD+ +  + M+
Sbjct: 828 NQWVGFDDERSLKTKMA 844


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 213 VHIFLSIFRQLKVIDMHILI*NALDIVRLQRSNPG 109
           +HI L+  R L V   H+L+ +   +   Q+  PG
Sbjct: 166 LHITLASGRTLTVTPSHLLVLDDRTMKYAQKLQPG 200


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 93  DVPFGVQDCFAAD 131
           D P+  QDC+  D
Sbjct: 75  DCPYNTQDCYRED 87


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +1

Query: 433 WMGYDDDDN 459
           W+GYDD+++
Sbjct: 325 WIGYDDEES 333


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 427 NLWMGYDDDDNSSSAMSGIGKLEY 498
           N W+GY+D ++    M  I    Y
Sbjct: 340 NQWVGYEDPESVQIKMDWIKSKGY 363


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 200 KKIWTATKKMYLLFSSNFLHNHE 268
           KK W+    MY L    +L N E
Sbjct: 120 KKRWSQCMYMYFLLGFRYLVNDE 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,227
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)