Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1006
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    25   0.87 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.1  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 322 SIFTYNVRHNVAFFESPTVFTVN 254
           S+F Y + HN  +F  P  F  N
Sbjct: 86  SLFIYGMHHNEKYFPEPEKFDPN 108


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 571 EKYRQCKEFVFECVDETVK 627
           EKYR  K F+ E   ETVK
Sbjct: 176 EKYRHQKNFINESNVETVK 194


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 452 LVRIFLILQDVADVLDN 402
           L+RIFL  + + D+L N
Sbjct: 94  LIRIFLAAESIDDLLSN 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,603
Number of Sequences: 336
Number of extensions: 3299
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)