Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1006
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.4  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   5.9  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   7.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 81  QTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAITKQ 188
           Q   DRL++ Q  L   K D++  K   SVLA   Q
Sbjct: 261 QKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQ 296



 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 72  LSEQTPDDRLESI-QNHLNKLKDDLIGNKMPLSVLAITKQLTKNPNE 209
           +S +   ++LE++  N+L + KD+L+     +SV    +QLT   NE
Sbjct: 819 MSLEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNE 865


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 DLIGNKMPLSVLAITKQLTKNPNEYADKHTQSH 236
           DL+GN +  S L++      NP  Y D H   H
Sbjct: 343 DLLGNIVEASTLSV------NPQYYGDLHNNGH 369


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 138 DLIGNKMPLSVLAITKQLTKNPNEYADKHTQSHVQVA 248
           D++GN +  S ++I      N N Y D H   HV +A
Sbjct: 357 DVLGNILERSAISI------NRNLYGDVHNMGHVLLA 387


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,990
Number of Sequences: 2352
Number of extensions: 13237
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)