BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1006 (762 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p pro... 125 8e-29 AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA... 125 8e-29 D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase... 108 7e-24 AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymera... 108 7e-24 S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA polymerase... 105 5e-23 X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase... 46 6e-05 AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p pro... 46 6e-05 AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA... 46 6e-05 AY058294-1|AAL13523.1| 327|Drosophila melanogaster GH05567p pro... 31 1.3 AL009188-2|CAA15672.1| 556|Drosophila melanogaster EG:165H7.1,F... 31 1.3 AE014298-32|AAF45503.1| 556|Drosophila melanogaster CG3972-PA p... 31 1.3 AY061597-1|AAL29145.1| 634|Drosophila melanogaster SD04822p pro... 29 5.2 S80254-1|AAB35643.1| 508|Drosophila melanogaster crocodile prot... 29 9.2 BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p pro... 29 9.2 BT001793-1|AAN71548.1| 508|Drosophila melanogaster RH24787p pro... 29 9.2 AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-P... 29 9.2 AE014296-3541|AAF51727.1| 508|Drosophila melanogaster CG5069-PA... 29 9.2 >AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p protein. Length = 746 Score = 125 bits (301), Expect = 8e-29 Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 8/179 (4%) Frame = +2 Query: 248 IEVNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSE--HLKVDFKYYLAHQL 421 + +N + +RR+KKGD+V Y+IC DGT N+A QRAYH++ELK SE L++D YYL HQ+ Sbjct: 427 LRMNRERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQI 486 Query: 422 HPVISRICEPIEGMDPARVADCLGLDPS--GTNKLLKEKPTTRKLMRSRTNKKSTDNAKS 595 HPV++R+ E +EG D +R+A+CLG+DP+ N ++ T + + K+T Sbjct: 487 HPVVTRMVEVLEGTDASRIAECLGMDPTKFRQNAQRTQRENTEQ-SEGESLLKTTLQLYR 545 Query: 596 LSSNASMK--L*NFEQSTRIDL*TGQRD--ISFLDRCQNEKCNVKPLDYLSSVQNQLSL 760 L + EQ G + I+ L +C +C P+ YL+SV+NQL L Sbjct: 546 LCEPFRFQCVTCKTEQLMASAYRPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQL 604 Score = 90.6 bits (215), Expect = 2e-18 Identities = 41/85 (48%), Positives = 59/85 (69%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 LDIVRRDWSQLA GK +L ++LSE+ +++L+++ L K+K + +PL + IT Sbjct: 345 LDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVIT 404 Query: 183 KQLTKNPNEYADKHTQSHVQVALRL 257 KQLT+ P EYA+ + HVQVALR+ Sbjct: 405 KQLTRTPQEYANSASLPHVQVALRM 429 >AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA protein. Length = 1488 Score = 125 bits (301), Expect = 8e-29 Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 8/179 (4%) Frame = +2 Query: 248 IEVNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSE--HLKVDFKYYLAHQL 421 + +N + +RR+KKGD+V Y+IC DGT N+A QRAYH++ELK SE L++D YYL HQ+ Sbjct: 1169 LRMNRERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQI 1228 Query: 422 HPVISRICEPIEGMDPARVADCLGLDPS--GTNKLLKEKPTTRKLMRSRTNKKSTDNAKS 595 HPV++R+ E +EG D +R+A+CLG+DP+ N ++ T + + K+T Sbjct: 1229 HPVVTRMVEVLEGTDASRIAECLGMDPTKFRQNAQRTQRENTEQ-SEGESLLKTTLQLYR 1287 Query: 596 LSSNASMK--L*NFEQSTRIDL*TGQRD--ISFLDRCQNEKCNVKPLDYLSSVQNQLSL 760 L + EQ G + I+ L +C +C P+ YL+SV+NQL L Sbjct: 1288 LCEPFRFQCVTCKTEQLMASAYRPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQL 1346 Score = 90.6 bits (215), Expect = 2e-18 Identities = 41/85 (48%), Positives = 59/85 (69%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 LDIVRRDWSQLA GK +L ++LSE+ +++L+++ L K+K + +PL + IT Sbjct: 1087 LDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVIT 1146 Query: 183 KQLTKNPNEYADKHTQSHVQVALRL 257 KQLT+ P EYA+ + HVQVALR+ Sbjct: 1147 KQLTRTPQEYANSASLPHVQVALRM 1171 >D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase alpha protein. Length = 1505 Score = 108 bits (260), Expect = 7e-24 Identities = 46/88 (52%), Positives = 67/88 (76%), Gaps = 2/88 (2%) Frame = +2 Query: 248 IEVNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSEH--LKVDFKYYLAHQL 421 + +N + +RR+KKGD+V C DGT N+A QRAYH++ELK SE L++D YYL HQ+ Sbjct: 1168 LRMNRERNRRYKKGDMVDLCDCLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQI 1227 Query: 422 HPVISRICEPIEGMDPARVADCLGLDPS 505 HPV++R+ E +EG D +R+A+CLG+DP+ Sbjct: 1228 HPVVTRMVEVLEGTDASRIAECLGMDPT 1255 Score = 87.4 bits (207), Expect = 2e-17 Identities = 39/85 (45%), Positives = 58/85 (68%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 LDIVRRDWSQLA GK +L ++LSE+ +++L+++ L K+K + +PL + IT Sbjct: 1086 LDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVIT 1145 Query: 183 KQLTKNPNEYADKHTQSHVQVALRL 257 KQLT+ P +Y + + HVQVALR+ Sbjct: 1146 KQLTRTPQDYRNSASLPHVQVALRM 1170 >AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymerase alpha 180K subunit protein. Length = 1415 Score = 108 bits (260), Expect = 7e-24 Identities = 46/88 (52%), Positives = 67/88 (76%), Gaps = 2/88 (2%) Frame = +2 Query: 248 IEVNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSEH--LKVDFKYYLAHQL 421 + +N + +RR+KKGD+V C DGT N+A QRAYH++ELK SE L++D YYL HQ+ Sbjct: 1168 LRMNRERNRRYKKGDMVDLCDCLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQI 1227 Query: 422 HPVISRICEPIEGMDPARVADCLGLDPS 505 HPV++R+ E +EG D +R+A+CLG+DP+ Sbjct: 1228 HPVVTRMVEVLEGTDASRIAECLGMDPT 1255 Score = 87.4 bits (207), Expect = 2e-17 Identities = 39/85 (45%), Positives = 58/85 (68%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 LDIVRRDWSQLA GK +L ++LSE+ +++L+++ L K+K + +PL + IT Sbjct: 1086 LDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVIT 1145 Query: 183 KQLTKNPNEYADKHTQSHVQVALRL 257 KQLT+ P +Y + + HVQVALR+ Sbjct: 1146 KQLTRTPQDYRNSASLPHVQVALRM 1170 >S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA polymerase-primase 180 kdasubunit protein. Length = 1490 Score = 105 bits (253), Expect = 5e-23 Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 2/88 (2%) Frame = +2 Query: 248 IEVNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSE--HLKVDFKYYLAHQL 421 + +N + +R +KKGD+V Y+IC DGT N A QRAYH++ELK SE L++D L HQ+ Sbjct: 1171 LRMNRERNRLYKKGDMVDYVICLDGTTNLAMQRAYHLDELKTSEDKKLQLDTNLLLGHQI 1230 Query: 422 HPVISRICEPIEGMDPARVADCLGLDPS 505 HPV++R+ E +EG D +R+A+CLG+DP+ Sbjct: 1231 HPVVTRMVEVLEGTDASRIAECLGMDPT 1258 Score = 90.6 bits (215), Expect = 2e-18 Identities = 41/85 (48%), Positives = 59/85 (69%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 LDIVRRDWSQLA GK +L ++LSE+ +++L+++ L K+K + +PL + IT Sbjct: 1089 LDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVIT 1148 Query: 183 KQLTKNPNEYADKHTQSHVQVALRL 257 KQLT+ P EYA+ + HVQVALR+ Sbjct: 1149 KQLTRTPQEYANSASLPHVQVALRM 1173 >X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase delta protein. Length = 1092 Score = 46.0 bits (104), Expect = 6e-05 Identities = 31/95 (32%), Positives = 54/95 (56%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 ++ VRRD S L A L ++L E+ PD + ++ ++ DL+ N++ +S L IT Sbjct: 817 IETVRRDNSPLVANLMNSCLQKLLIERDPDGAVA----YVKQVIADLLCNRIDISHLVIT 872 Query: 183 KQLTKNPNEYADKHTQSHVQVALRLTVKTVGDSKK 287 K+L K +YA K Q+HV++A ++ + G + K Sbjct: 873 KELAK--TDYAAK--QAHVELAAKMKKRDPGTAPK 903 Score = 41.1 bits (92), Expect = 0.002 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +2 Query: 281 KKGDIVPYIICEDGTANSATQRAYH-IEELKNSEHLKVDFKYYLAHQLHPVISRICEPIE 457 K GD VPY+IC A Q+A + L+NS + +D YYL QL + RI EPI Sbjct: 903 KLGDRVPYVICAAAKNTPAYQKAEDPLYVLENS--VPIDATYYLEQQLSKPLLRIFEPIL 960 Query: 458 G 460 G Sbjct: 961 G 961 >AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p protein. Length = 1092 Score = 46.0 bits (104), Expect = 6e-05 Identities = 31/95 (32%), Positives = 54/95 (56%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 ++ VRRD S L A L ++L E+ PD + ++ ++ DL+ N++ +S L IT Sbjct: 817 IETVRRDNSPLVANLMNSCLQKLLIERDPDGAVA----YVKQVIADLLCNRIDISHLVIT 872 Query: 183 KQLTKNPNEYADKHTQSHVQVALRLTVKTVGDSKK 287 K+L K +YA K Q+HV++A ++ + G + K Sbjct: 873 KELAK--TDYAAK--QAHVELAAKMKKRDPGTAPK 903 Score = 41.1 bits (92), Expect = 0.002 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +2 Query: 281 KKGDIVPYIICEDGTANSATQRAYH-IEELKNSEHLKVDFKYYLAHQLHPVISRICEPIE 457 K GD VPY+IC A Q+A + L+NS + +D YYL QL + RI EPI Sbjct: 903 KLGDRVPYVICAAAKNTPAYQKAEDPLYVLENS--VPIDATYYLEQQLSKPLLRIFEPIL 960 Query: 458 G 460 G Sbjct: 961 G 961 >AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA protein. Length = 1092 Score = 46.0 bits (104), Expect = 6e-05 Identities = 31/95 (32%), Positives = 54/95 (56%) Frame = +3 Query: 3 LDIVRRDWSQLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAIT 182 ++ VRRD S L A L ++L E+ PD + ++ ++ DL+ N++ +S L IT Sbjct: 817 IETVRRDNSPLVANLMNSCLQKLLIERDPDGAVA----YVKQVIADLLCNRIDISHLVIT 872 Query: 183 KQLTKNPNEYADKHTQSHVQVALRLTVKTVGDSKK 287 K+L K +YA K Q+HV++A ++ + G + K Sbjct: 873 KELAK--TDYAAK--QAHVELAAKMKKRDPGTAPK 903 Score = 41.1 bits (92), Expect = 0.002 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +2 Query: 281 KKGDIVPYIICEDGTANSATQRAYH-IEELKNSEHLKVDFKYYLAHQLHPVISRICEPIE 457 K GD VPY+IC A Q+A + L+NS + +D YYL QL + RI EPI Sbjct: 903 KLGDRVPYVICAAAKNTPAYQKAEDPLYVLENS--VPIDATYYLEQQLSKPLLRIFEPIL 960 Query: 458 G 460 G Sbjct: 961 G 961 >AY058294-1|AAL13523.1| 327|Drosophila melanogaster GH05567p protein. Length = 327 Score = 31.5 bits (68), Expect = 1.3 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 3/100 (3%) Frame = +3 Query: 12 VRRDWSQLAAEAGKFILSQILSE--QTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAITK 185 V +D + E + I+ +I + TP + E +++ L+ + ++ +G K L++L Sbjct: 43 VVKDRKENFQEESRAIVEEISTPVASTPASKKEGLRDDLDDIDENDVGAKRRLALLDAMV 102 Query: 186 QLTKNPN-EYADKHTQSHVQVALRLTVKTVGDSKKATLCL 302 ++ KNP+ E+ +K V + T LC+ Sbjct: 103 EMAKNPDIEWNEKDIMDEVNTIMFEGHDTTSAGSSFALCM 142 >AL009188-2|CAA15672.1| 556|Drosophila melanogaster EG:165H7.1,FBgn0011757;ASC-T1 protein. Length = 556 Score = 31.5 bits (68), Expect = 1.3 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 3/100 (3%) Frame = +3 Query: 12 VRRDWSQLAAEAGKFILSQILSE--QTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAITK 185 V +D + E + I+ +I + TP + E +++ L+ + ++ +G K L++L Sbjct: 272 VVKDRKENFQEESRAIVEEISTPVASTPASKKEGLRDDLDDIDENDVGAKRRLALLDAMV 331 Query: 186 QLTKNPN-EYADKHTQSHVQVALRLTVKTVGDSKKATLCL 302 ++ KNP+ E+ +K V + T LC+ Sbjct: 332 EMAKNPDIEWNEKDIMDEVNTIMFEGHDTTSAGSSFALCM 371 >AE014298-32|AAF45503.1| 556|Drosophila melanogaster CG3972-PA protein. Length = 556 Score = 31.5 bits (68), Expect = 1.3 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 3/100 (3%) Frame = +3 Query: 12 VRRDWSQLAAEAGKFILSQILSE--QTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAITK 185 V +D + E + I+ +I + TP + E +++ L+ + ++ +G K L++L Sbjct: 272 VVKDRKENFQEESRAIVEEISTPVASTPASKKEGLRDDLDDIDENDVGAKRRLALLDAMV 331 Query: 186 QLTKNPN-EYADKHTQSHVQVALRLTVKTVGDSKKATLCL 302 ++ KNP+ E+ +K V + T LC+ Sbjct: 332 EMAKNPDIEWNEKDIMDEVNTIMFEGHDTTSAGSSFALCM 371 >AY061597-1|AAL29145.1| 634|Drosophila melanogaster SD04822p protein. Length = 634 Score = 29.5 bits (63), Expect = 5.2 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Frame = +2 Query: 503 SGTNKLLKEKPTTRKLMRSRTNK---KSTDNAKSLSSNASMKL*NFEQSTRIDL*TGQRD 673 S L K K +K S +N KST NAK++ N + K NF + + + Sbjct: 9 SAAKALKKTKKVNKKQQESLSNGNKVKSTPNAKNIQPNNNNKQTNFNNNNSSNNNNNNNN 68 Query: 674 ISFLDRCQNEKCNVKPLD 727 S + N K N P++ Sbjct: 69 NSSIVSNNNSKNNTLPIN 86 >S80254-1|AAB35643.1| 508|Drosophila melanogaster crocodile protein. Length = 508 Score = 28.7 bits (61), Expect = 9.2 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +2 Query: 299 PYIICEDGTANSATQRAYHIEELKNSEHLKVDFKYYLAHQLHPV 430 PY + ED A A+ + +H+ + H + + ++AH HP+ Sbjct: 279 PYHLNEDNLATVASSQMHHVHHAAAAHHAQ-QLQRHVAHVAHPL 321 >BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p protein. Length = 320 Score = 28.7 bits (61), Expect = 9.2 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 323 TANSATQRAYHIEELKNSEHLKVDFKYYLAHQL-HPVISRICEPIEGMDPARVADCLGLD 499 T NS + HIE+ + HLK+D HQ+ HP IC+ + + + CL Sbjct: 67 TNNSISSVKEHIEKFEKQGHLKID-----EHQIVHPA-QTICDHLRSIKFEGLIYCLATS 120 Query: 500 P 502 P Sbjct: 121 P 121 >BT001793-1|AAN71548.1| 508|Drosophila melanogaster RH24787p protein. Length = 508 Score = 28.7 bits (61), Expect = 9.2 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +2 Query: 299 PYIICEDGTANSATQRAYHIEELKNSEHLKVDFKYYLAHQLHPV 430 PY + ED A A+ + +H+ + H + + ++AH HP+ Sbjct: 279 PYHLNEDNLATVASSQMHHVHHAAAAHHAQ-QLQRHVAHVAHPL 321 >AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-PA protein. Length = 320 Score = 28.7 bits (61), Expect = 9.2 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 323 TANSATQRAYHIEELKNSEHLKVDFKYYLAHQL-HPVISRICEPIEGMDPARVADCLGLD 499 T NS + HIE+ + HLK+D HQ+ HP IC+ + + + CL Sbjct: 67 TNNSISSVKEHIEKFEKQGHLKID-----EHQIVHPA-QTICDHLRSIKFEGLIYCLATS 120 Query: 500 P 502 P Sbjct: 121 P 121 >AE014296-3541|AAF51727.1| 508|Drosophila melanogaster CG5069-PA protein. Length = 508 Score = 28.7 bits (61), Expect = 9.2 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +2 Query: 299 PYIICEDGTANSATQRAYHIEELKNSEHLKVDFKYYLAHQLHPV 430 PY + ED A A+ + +H+ + H + + ++AH HP+ Sbjct: 279 PYHLNEDNLATVASSQMHHVHHAAAAHHAQ-QLQRHVAHVAHPL 321 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,273,778 Number of Sequences: 53049 Number of extensions: 616319 Number of successful extensions: 1694 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1683 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3499501170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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