Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1006
(762 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 25 1.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.8
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 23 3.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 4.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.4
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 7.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 7.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 7.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 7.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 7.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.1
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 138 DLIGNKMPLSVLAITKQLTKNPNEYADKHTQSHVQVA 248
D++GN M S+L+ N N Y D H HV ++
Sbjct: 343 DVLGNIMEASILS------PNQNVYGDLHNFGHVAIS 373
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 413 HQLHPVISRICEPIEG 460
H+L+P S C+P+ G
Sbjct: 69 HRLYPAFSSSCDPVPG 84
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 EELKNSEHLKVDFKYYLAHQ 418
EEL+ +E +VD ++YL +
Sbjct: 74 EELRRTEAFEVDLEFYLGKE 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 466 IHAFYWFAY 440
I+ FYWFAY
Sbjct: 438 INVFYWFAY 446
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 586 IVGTFLVRSRPHKFPS 539
++GTF + +PH +P+
Sbjct: 441 VIGTFKLHRQPHIYPN 456
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 624 KTLNRVRESIYKLDKETFRF*IAV 695
+T +RVR + +LD + +++ IAV
Sbjct: 501 QTQSRVRAHLKRLDHQPYQYKIAV 524
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 515 KLLKEKPTTRKLMRSR-TNKKSTDNAKS 595
KLL+E+ + ++ RSR KKS N S
Sbjct: 28 KLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 515 KLLKEKPTTRKLMRSR-TNKKSTDNAKS 595
KLL+E+ + ++ RSR KKS N S
Sbjct: 28 KLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 515 KLLKEKPTTRKLMRSR-TNKKSTDNAKS 595
KLL+E+ + ++ RSR KKS N S
Sbjct: 28 KLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 515 KLLKEKPTTRKLMRSR-TNKKSTDNAKS 595
KLL+E+ + ++ RSR KKS N S
Sbjct: 28 KLLEERTSRKRYSRSREREKKSYKNENS 55
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 515 KLLKEKPTTRKLMRSR-TNKKSTDNAKS 595
KLL+E+ + ++ RSR KKS N S
Sbjct: 261 KLLEERTSRKRYSRSREREKKSYKNENS 288
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,659
Number of Sequences: 438
Number of extensions: 3820
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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