Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1005
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    25   0.47 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   5.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.8  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 NLTQHSIAISIKNKIKPKRV 50
           N T H+I  S+ N +KPK V
Sbjct: 313 NTTNHAIVQSLVNSMKPKEV 332


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 418  YYLQLKYIIFNKTNKRLKTIPVNSKRSDDPTLVQQ 314
            Y L + Y +FN  N    T  V      DP  VQ+
Sbjct: 1016 YLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAVQK 1050


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 418  YYLQLKYIIFNKTNKRLKTIPVNSKRSDDPTLVQQ 314
            Y L + Y +FN  N    T  V      DP  VQ+
Sbjct: 1016 YLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAVQK 1050


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 188 CERQKYNHNRYKDHTGRPSCR 126
           CE   YN+   +D   RPS R
Sbjct: 123 CELAMYNYVEMRDLVTRPSYR 143


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 188 CERQKYNHNRYKDHTGRPSCR 126
           CE   YN+   +D   RPS R
Sbjct: 356 CELAMYNYVEMRDLVTRPSYR 376


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 188 CERQKYNHNRYKDHTGRPSCR 126
           CE   YN+   +D   RPS R
Sbjct: 356 CELAMYNYVEMRDLVTRPSYR 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,382
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)