Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1005
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    25   1.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   3.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.5  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 206 GHVKMYCERQKYNHNRYKDHT 144
           G++ MY    K+ HN Y+D T
Sbjct: 343 GNIIMYSSYNKFRHNVYRDAT 363


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 60  GLILFLIEIAILCWVKFYDLSPTAAW 137
           GLILFL+ + ++ W K  D +    W
Sbjct: 408 GLILFLLGMWMVLWEKTLDKNKEEIW 433


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 478 VVSTFISATDHVYLCYLCTG 537
           VVST  +A+DH Y+ Y   G
Sbjct: 201 VVSTSYTASDHRYVLYTVGG 220


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 215  AQVRSHGDRYQRIKLLKEQ 271
            A+VRS G+RY+R  L+ E+
Sbjct: 1139 AEVRSLGERYRRQLLVVEE 1157


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 176 KYNHNRYKDHTGRPSCRRTQIV 111
           +Y  ++Y DH+G  S R T ++
Sbjct: 102 QYTVSKYHDHSGYGSSRNTFLI 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,242
Number of Sequences: 2352
Number of extensions: 12089
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)