Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1004
(692 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 25 0.52
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 2.1
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 2.1
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 2.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.8
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 23 2.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.8
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 4.8
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 4.8
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 4.8
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 6.4
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 6.4
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 6.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 6.4
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 439 SAWANLTGRTPIQIVGDDLTVT 504
S W ++TG TP+ V D ++ T
Sbjct: 90 SQWEDVTGSTPLTFVNDTVSFT 111
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.4 bits (48), Expect = 2.1
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 456
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.4 bits (48), Expect = 2.1
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 456
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.4 bits (48), Expect = 2.1
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 456
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 592 QLMLTCWPEER 624
QLML CW +ER
Sbjct: 869 QLMLDCWQKER 879
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 681 SAIKVSSVSPDL*ET 637
S IKV S+SPDL ET
Sbjct: 184 SNIKVISISPDLVET 198
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 319 NPDSNPGDYLSSDKLADVY 375
NPD P +YL D + Y
Sbjct: 972 NPDQKPTEYLLEDSMKQQY 990
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 391 DFPMVSIEDPFDQDDWSAWANL 456
DFP +S ED + +W+ W L
Sbjct: 11 DFPSLSFEDSDEGSNWN-WNTL 31
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 691 NYQVGNKGIFGLTRS 647
N+Q G +GIFG++ S
Sbjct: 250 NFQWGEEGIFGMSLS 264
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 4.8
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 415 DPFDQDDWSAWANLTGR---TPIQIVGD-DLTVTNLSVSLLQLRRRHA 546
+P+D+D S W +T + V D ++T+T L+ + + R A
Sbjct: 112 NPYDRDSLSCWLQMTKHHNFIKVCSVNDVNMTITELTDPVKEFWERRA 159
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 152 VGDEGGFAPNIQNNKDALYLIQDAIQK 232
V + G F NI ++YL ++ I+K
Sbjct: 73 VDESGNFKENIVQELTSIYLDENVIKK 99
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 152 VGDEGGFAPNIQNNKDALYLIQDAIQK 232
V + G F NI ++YL ++ I+K
Sbjct: 73 VDESGNFKENIVQELTSIYLDENVIKK 99
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 152 VGDEGGFAPNIQNNKD 199
+GD GFA I NN D
Sbjct: 203 IGDNEGFALIIYNNSD 218
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 175 SETTFITNSRRVQSKLLLNDL 113
+E+TFI RR+ S + D+
Sbjct: 663 AESTFIPEERRIYSPITFQDV 683
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,931
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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