Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1003
(406 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y221 Cluster: 60S ribosome subunit biogenesis protein... 145 3e-34
UniRef50_Q503P2 Cluster: Zgc:110384; n=2; Eukaryota|Rep: Zgc:110... 144 4e-34
UniRef50_Q1MTQ9 Cluster: RNA-binding protein; n=5; Fungi/Metazoa... 129 2e-29
UniRef50_Q55AV7 Cluster: Putative uncharacterized protein; n=2; ... 123 2e-27
UniRef50_Q86EJ8 Cluster: Clone ZZD271 mRNA sequence; n=1; Schist... 120 1e-26
UniRef50_Q08962 Cluster: 60S ribosome subunit biogenesis protein... 115 3e-25
UniRef50_Q018J3 Cluster: Ribosome biogenesis protein NIP7; n=1; ... 110 1e-23
UniRef50_Q4Q453 Cluster: Putative uncharacterized protein; n=6; ... 103 1e-21
UniRef50_A5K390 Cluster: Putative uncharacterized protein; n=4; ... 92 4e-18
UniRef50_Q4U9N7 Cluster: 60S ribosome subunit biogenesis protein... 87 1e-16
UniRef50_A2YPT0 Cluster: Putative uncharacterized protein; n=4; ... 85 4e-16
UniRef50_Q8SUF5 Cluster: Putative uncharacterized protein ECU10_... 83 3e-15
UniRef50_A1C842 Cluster: 60S ribosome biogenesis protein Nip7, p... 83 3e-15
UniRef50_Q7QVJ2 Cluster: GLP_21_27280_26585; n=1; Giardia lambli... 75 7e-13
UniRef50_UPI0000E48BFE Cluster: PREDICTED: similar to HSPC180; n... 64 1e-09
UniRef50_Q9Y221-2 Cluster: Isoform 2 of Q9Y221 ; n=4; Mammalia|R... 63 2e-09
UniRef50_A7EVF0 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 1.6
UniRef50_Q0CW14 Cluster: Predicted protein; n=1; Aspergillus ter... 32 3.8
UniRef50_Q2Y563 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q9HJ45 Cluster: Putative uncharacterized protein Ta1127... 32 5.0
UniRef50_Q2W6F7 Cluster: Mu-like prophage FluMu protein gp29; n=... 31 8.7
UniRef50_Q0AAW3 Cluster: Cyclic nucleotide-binding protein; n=1;... 31 8.7
UniRef50_O74504 Cluster: Uncharacterized protein C594.01; n=1; S... 31 8.7
>UniRef50_Q9Y221 Cluster: 60S ribosome subunit biogenesis protein
NIP7 homolog; n=18; Eumetazoa|Rep: 60S ribosome subunit
biogenesis protein NIP7 homolog - Homo sapiens (Human)
Length = 180
Score = 145 bits (352), Expect = 3e-34
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 6e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>UniRef50_Q503P2 Cluster: Zgc:110384; n=2; Eukaryota|Rep: Zgc:110384
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 180
Score = 144 bits (350), Expect = 4e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT KFRLHITAL +++PYA FKVWVKP +EQ FLYG+HI+KSGLGR
Sbjct: 61 DKLVSVGTCFGKFTKTQKFRLHITALDFLAPYAKFKVWVKPGSEQSFLYGNHIMKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT K+QGV+V +M+D+P+GF
Sbjct: 121 ITENTDKYQGVLVYSMADVPLGF 143
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+RTT ECR DP+A +VFHQAD+GEYIRSEDTLT
Sbjct: 147 ARTTQECRKVDPMAIVVFHQADIGEYIRSEDTLT 180
>UniRef50_Q1MTQ9 Cluster: RNA-binding protein; n=5; Fungi/Metazoa
group|Rep: RNA-binding protein - Schizosaccharomyces
pombe (Fission yeast)
Length = 180
Score = 129 bits (311), Expect = 2e-29
Identities = 53/82 (64%), Positives = 70/82 (85%)
Frame = +2
Query: 8 NLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRI 187
NL+S G CFGKFTKTNKFRLHITAL YI+ YA +K+WVK + E FLYG+H++K+ +GRI
Sbjct: 62 NLMSLGICFGKFTKTNKFRLHITALDYIAQYARYKIWVKSNGEMPFLYGNHVLKAHVGRI 121
Query: 188 TENTPKHQGVVVLTMSDIPIGF 253
T++TP+HQGVV+ +M+D P+GF
Sbjct: 122 TDDTPQHQGVVIYSMNDTPLGF 143
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 258 TSRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
T+R+T E R +P A + FHQADVGEY+R EDTL
Sbjct: 146 TARSTLELRRLEPTAIVAFHQADVGEYLRDEDTL 179
>UniRef50_Q55AV7 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 229
Score = 123 bits (296), Expect = 2e-27
Identities = 50/83 (60%), Positives = 71/83 (85%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
+ L S GTCFG+FTKT KF+L+IT L Y++ YA +KVWVKPS+E ++YG++++K+GLGR
Sbjct: 111 EGLCSLGTCFGRFTKTGKFKLNITCLDYLAQYAKYKVWVKPSSEMSWMYGNNLLKAGLGR 170
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITE+TP +QGVV+ +M+D+PIGF
Sbjct: 171 ITEDTPANQGVVLFSMNDVPIGF 193
Score = 48.4 bits (110), Expect = 5e-05
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 258 TSRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
TS++T ECR DP A +V+H DVGEY+R ED +
Sbjct: 196 TSKSTHECRKLDPQALVVYHYGDVGEYLRDEDIM 229
>UniRef50_Q86EJ8 Cluster: Clone ZZD271 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD271 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 151
Score = 120 bits (288), Expect = 1e-26
Identities = 48/81 (59%), Positives = 70/81 (86%)
Frame = +2
Query: 8 NLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRI 187
+L+S GTC G+F+KT FRLHITAL ++SPYA F+VW+K SAEQQFLYG ++++SG+ ++
Sbjct: 61 HLLSFGTCIGRFSKTGNFRLHITALDFLSPYAMFRVWLKASAEQQFLYGQNVLRSGIAKM 120
Query: 188 TENTPKHQGVVVLTMSDIPIG 250
++NTP++ GVVV+ MSD+P+G
Sbjct: 121 SDNTPQYPGVVVMNMSDMPLG 141
>UniRef50_Q08962 Cluster: 60S ribosome subunit biogenesis protein
NIP7; n=48; Eukaryota|Rep: 60S ribosome subunit
biogenesis protein NIP7 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 181
Score = 115 bits (277), Expect = 3e-25
Identities = 43/82 (52%), Positives = 67/82 (81%)
Frame = +2
Query: 8 NLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRI 187
NL+S G C GKFTKT KFRLHIT+LT ++ +A +K+W+KP+ E FLYG+H++K+ +G++
Sbjct: 62 NLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNHVLKAHVGKM 121
Query: 188 TENTPKHQGVVVLTMSDIPIGF 253
+++ P+H GV+V M+D+P+GF
Sbjct: 122 SDDIPEHAGVIVFAMNDVPLGF 143
Score = 43.2 bits (97), Expect = 0.002
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 258 TSRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
++++T+E R+ P + F QAD+GEY+R EDTL
Sbjct: 146 SAKSTSESRNMQPTGIVAFRQADIGEYLRDEDTL 179
>UniRef50_Q018J3 Cluster: Ribosome biogenesis protein NIP7; n=1;
Ostreococcus tauri|Rep: Ribosome biogenesis protein NIP7
- Ostreococcus tauri
Length = 340
Score = 110 bits (264), Expect = 1e-23
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LV+ GTC GKFT ++KFRL I AL ++ +A K+WVKP++E F+YG+H++KSGLGR
Sbjct: 254 DELVALGTCLGKFTHSDKFRLTIGALDLLAAHAKHKMWVKPTSEMGFMYGNHLLKSGLGR 313
Query: 185 ITENTPKHQGVVVLTMSDIPIGFA 256
I+EN + GVV+ +M+D+PIGFA
Sbjct: 314 ISENVAANAGVVIYSMADVPIGFA 337
>UniRef50_Q4Q453 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 181
Score = 103 bits (247), Expect = 1e-21
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 8 NLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRI 187
NL+ G F K T R+ +TAL YI+ Y+ FK+WVKP+ EQ+FLYG ++ ++GLGRI
Sbjct: 63 NLMGIGVLFAKVTHNGNVRIQVTALEYIAQYSLFKIWVKPNQEQKFLYGGNVSRAGLGRI 122
Query: 188 TENTPKHQGVVVLTMSDIPIGF 253
TE+TPK+Q V V +M DIP+GF
Sbjct: 123 TESTPKYQKVAVFSMGDIPLGF 144
Score = 40.3 bits (90), Expect = 0.014
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T ECR + + ++FH+ADVGEY+R E +T
Sbjct: 148 AQSTLECRKCEMNSQVLFHEADVGEYLRDEARMT 181
>UniRef50_A5K390 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 186
Score = 91.9 bits (218), Expect = 4e-18
Identities = 36/83 (43%), Positives = 62/83 (74%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
++L+S G C GKFTK N F + IT+L++++ + K+W+K S E+ FL+G++++KS L +
Sbjct: 68 NSLISLGICLGKFTKANNFFIKITSLSFLNEFCIHKIWLKESGEKNFLFGNNVLKSHLLK 127
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
+++N K G++VL+M+D PIGF
Sbjct: 128 VSDNIKKGDGIIVLSMNDSPIGF 150
Score = 31.9 bits (69), Expect = 5.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 264 RTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
R T + + + ++ HQ DVGEY+RSE T+
Sbjct: 155 RNTQDIKILNVTDIVLIHQGDVGEYLRSEATI 186
>UniRef50_Q4U9N7 Cluster: 60S ribosome subunit biogenesis protein
(Nip7 homologue), putative; n=2; Theileria|Rep: 60S
ribosome subunit biogenesis protein (Nip7 homologue),
putative - Theileria annulata
Length = 182
Score = 87.0 bits (206), Expect = 1e-16
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +2
Query: 11 LVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRIT 190
L+SAG C GKFTK+ +FRLHITAL Y+S Y+ KVW+K +Q FLYG +++K + +I+
Sbjct: 73 LISAGVCLGKFTKSKQFRLHITALEYLSYYSKNKVWLK--MDQPFLYGGNVLKKHVDQIS 130
Query: 191 ENTPKHQGVVVLTMSDIPIGF 253
E ++ GVVV++ +IP+GF
Sbjct: 131 EGIEQNAGVVVMS-KNIPLGF 150
>UniRef50_A2YPT0 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 188
Score = 85.4 bits (202), Expect = 4e-16
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +2
Query: 11 LVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRIT 190
L GT GKFT F L + AL ++ +A +VW+KP E+ FL+G+ + KS L RIT
Sbjct: 71 LAGVGTPIGKFTHGGAFHLTVHALDLLAAHARRRVWLKPDTERSFLFGNSVPKSSLARIT 130
Query: 191 ENTPKHQGVVVLTMSDIPIGF 253
ENT + GVVV++M+D+P+GF
Sbjct: 131 ENTKANDGVVVMSMADVPLGF 151
Score = 41.1 bits (92), Expect = 0.008
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
+R+ +CR AD A +V HQ+D GEY+R E+ L
Sbjct: 155 ARSAQDCRKADTNAVVVLHQSDAGEYLRREEEL 187
>UniRef50_Q8SUF5 Cluster: Putative uncharacterized protein
ECU10_0670; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0670 - Encephalitozoon
cuniculi
Length = 176
Score = 82.6 bits (195), Expect = 3e-15
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +2
Query: 8 NLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRI 187
NL GT GKFTK+ FRL + +L +S +A KVW+K SAE ++YG++ +KS + RI
Sbjct: 59 NLGMVGTVIGKFTKSGSFRLGVASLNLLSRWAIHKVWIKNSAEMNYVYGNNALKSHVFRI 118
Query: 188 TENTPKHQGVVVLTMSDIPIGF 253
+E P + GV V D+P+GF
Sbjct: 119 SEGIPINSGVFVFNQHDVPLGF 140
>UniRef50_A1C842 Cluster: 60S ribosome biogenesis protein Nip7,
putative; n=2; Pezizomycotina|Rep: 60S ribosome
biogenesis protein Nip7, putative - Aspergillus clavatus
Length = 207
Score = 82.6 bits (195), Expect = 3e-15
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 21/104 (20%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHIT---------------------ALTYISPYAPFKVWV 121
D L+S G C GKFTKT KFR+HIT AL I+P+A +KVW+
Sbjct: 65 DTLLSLGICIGKFTKTGKFRIHITGANDPSEMVKVAWLANRVARLALDVIAPHARYKVWI 124
Query: 122 KPSAEQQFLYGHHIIKSGLGRITENTPKHQGVVVLTMSDIPIGF 253
K + +LYG +++K+ +GR +E+ P+H GVVV +D P+GF
Sbjct: 125 KDNGIMPYLYGSNVVKAHVGRWSEDIPEHTGVVVYDSNDTPLGF 168
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 258 TSRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
T+R+TAE R DP A VF QADVGEY+R EDTL
Sbjct: 171 TARSTAEIRKLDPTAIAVFRQADVGEYLREEDTL 204
>UniRef50_Q7QVJ2 Cluster: GLP_21_27280_26585; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_21_27280_26585 - Giardia lamblia
ATCC 50803
Length = 231
Score = 74.5 bits (175), Expect = 7e-13
Identities = 31/88 (35%), Positives = 54/88 (61%)
Frame = +2
Query: 11 LVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRIT 190
L+ +G GKFT KF + ITAL ++ +AP+++ + P++E FLY + ++KS + ++
Sbjct: 114 LIGSGLLIGKFTHHKKFHIKITALPLLAVFAPYRIRITPASELSFLYKNDVMKSHITHMS 173
Query: 191 ENTPKHQGVVVLTMSDIPIGFAYFKNDG 274
E P + GVV+++ D P+GF G
Sbjct: 174 EGIPDNAGVVIVSADDQPVGFGVTTKSG 201
Score = 41.5 bits (93), Expect = 0.006
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 258 TSRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
T+++ E ++DP + IV HQADVGE++R +DT+
Sbjct: 197 TTKSGNEALNSDPASKIVIHQADVGEFLRDQDTM 230
>UniRef50_UPI0000E48BFE Cluster: PREDICTED: similar to HSPC180; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
HSPC180 - Strongylocentrotus purpuratus
Length = 162
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAP-FKVWVKPSAE 136
DNL+S GTCFGKF+KT KFRLHITAL Y++PYA F V K + E
Sbjct: 90 DNLISFGTCFGKFSKTKKFRLHITALDYLAPYAKGFGVAAKSTQE 134
Score = 58.8 bits (136), Expect = 4e-08
Identities = 22/33 (66%), Positives = 30/33 (90%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
+++T ECRH DP++ IVFHQAD+GEY+R+EDTL
Sbjct: 129 AKSTQECRHTDPMSIIVFHQADIGEYLRNEDTL 161
>UniRef50_Q9Y221-2 Cluster: Isoform 2 of Q9Y221 ; n=4; Mammalia|Rep:
Isoform 2 of Q9Y221 - Homo sapiens (Human)
Length = 133
Score = 63.3 bits (147), Expect = 2e-09
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYA 103
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYA 93
Score = 54.8 bits (126), Expect = 6e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 100 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 133
>UniRef50_A7EVF0 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 298
Score = 33.5 bits (73), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 82 DLHITLCAVQSVGEAVCGTTVLVWTPH 162
D+H+T+C + S G VC T VW H
Sbjct: 197 DIHVTICGLSSDGVLVCTTVTEVWVIH 223
>UniRef50_Q0CW14 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 673
Score = 32.3 bits (70), Expect = 3.8
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +3
Query: 240 FRLALRTSRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
FRL LR RT +C D L TIV D G + SEDT T
Sbjct: 83 FRLTLR-KRTDGDCDEGDDL-TIVTRDDDRGSKLESEDTQT 121
>UniRef50_Q2Y563 Cluster: Putative uncharacterized protein; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Putative
uncharacterized protein - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 229
Score = 31.9 bits (69), Expect = 5.0
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 347 RAYIFSYVGLVEDNRRQRISVSTFCRRS*STQSQSEYLTSLIPPHL 210
RA + + VE NR QR + ++ S + Q EYL SL PP L
Sbjct: 113 RAKVLDQIAEVERNRNQRSNQTSNQTELASAKKQLEYLVSLQPPSL 158
>UniRef50_Q9HJ45 Cluster: Putative uncharacterized protein Ta1127;
n=3; Thermoplasma|Rep: Putative uncharacterized protein
Ta1127 - Thermoplasma acidophilum
Length = 529
Score = 31.9 bits (69), Expect = 5.0
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 2 PDNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLG 181
P+ L C+G K N+ ++ T P PF + + AE Q+L + I K L
Sbjct: 94 PELLSLKSICYGSLGKFNESKIEATKAIKADPNYPFAYYNRAKAE-QYLEEYDIAKKDLQ 152
Query: 182 RITENTP 202
+ E P
Sbjct: 153 KYLEMQP 159
>UniRef50_Q2W6F7 Cluster: Mu-like prophage FluMu protein gp29; n=1;
Magnetospirillum magneticum AMB-1|Rep: Mu-like prophage
FluMu protein gp29 - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 534
Score = 31.1 bits (67), Expect = 8.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 25 DMLRKVHKDK*I*VAHYSFDLHITLCAVQSVGEAVCGTTVLVWTPHHQKWLGP 183
D++R+ D + + Y FD+ + SVGE + TT +WTP +W P
Sbjct: 112 DLVREHLVDSGV-IGKYLFDMMDAVGKGFSVGEILWNTTANLWTPTRIEWRDP 163
>UniRef50_Q0AAW3 Cluster: Cyclic nucleotide-binding protein; n=1;
Alkalilimnicola ehrlichei MLHE-1|Rep: Cyclic
nucleotide-binding protein - Alkalilimnicola ehrlichei
(strain MLHE-1)
Length = 625
Score = 31.1 bits (67), Expect = 8.7
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 115 VGEAVCGTTVLVWTPHHQKWLGPDNRKYTETSRCGGINDVRYSDWLCVLQERRQNVDTLI 294
VG A+C ++ P +QK L +T ++ G R+S+ + + E D L+
Sbjct: 406 VGYAICPGEIMARNPAYQKTLEEWQTSFTRAAQYPGSKAARWSN-IVLDFELLYGEDRLV 464
Query: 295 --LWRRLSSTRPT 327
LWR + T PT
Sbjct: 465 DSLWRHVLDTLPT 477
>UniRef50_O74504 Cluster: Uncharacterized protein C594.01; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C594.01 - Schizosaccharomyces pombe (Fission yeast)
Length = 791
Score = 31.1 bits (67), Expect = 8.7
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 344 AYIFSYVGLVEDNRRQRISVSTFCRRS*STQSQSEYLTSLIPPHLDVSVYFLLSGP 177
++IF V++ RR+ S S FCR + Y S PH+D + + L GP
Sbjct: 677 SFIFGEHKSVKE-RRKYFSSSKFCRENFFYDKDVVYCMSFFSPHMDFNTFNLNIGP 731
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,276,734
Number of Sequences: 1657284
Number of extensions: 8411032
Number of successful extensions: 21198
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21196
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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