Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1003
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.4  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   3.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.6  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   7.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   9.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 279 CRHADPLATIVFHQADVGEYIRSEDTLT 362
           CRH   +A++V H  D    +  ED LT
Sbjct: 571 CRHVTEMASLVIHDVDP---LAREDDLT 595


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 17  SAGTCFGKFTKTNKFRLH 70
           S   CF +FT++N  + H
Sbjct: 269 SCDVCFARFTQSNSLKAH 286


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 276 ECRHADPLATIVFHQADVGEYIRSE 350
           EC+H D LA   FH  D+    R E
Sbjct: 287 ECKHRDRLAQRAFH-TDLYSTFRDE 310


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 341 YIFSYVGLVEDNRRQRI 291
           YIF+Y+ L E   RQ++
Sbjct: 423 YIFAYINLQEVRHRQKM 439


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -1

Query: 373  IIYYVSVSSERIYSPTSAWWKTIVAKGSACRHSAVVLEVRKANRNI 236
            ++ YV  + ++I S     W T +A+G A      ++    A RN+
Sbjct: 920  LLDYVRNNKDKIGSKALLNWSTQIARGMAYLEERRLVHRDLAARNV 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,897
Number of Sequences: 2352
Number of extensions: 8925
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)