Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1003
(406 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015941-1|AAH15941.1| 180|Homo sapiens nuclear import 7 homolo... 145 4e-35
AF132971-1|AAD27746.1| 180|Homo sapiens CGI-37 protein protein. 145 4e-35
AB112439-1|BAD05056.1| 180|Homo sapiens hypothetical protein pr... 145 4e-35
AB062479-1|BAB93504.1| 180|Homo sapiens OK/SW-CL.78 protein. 145 4e-35
AB062398-1|BAB93485.1| 180|Homo sapiens OK/SW-cl.76 protein. 145 4e-35
AL121829-14|CAC15526.1| 488|Homo sapiens protein ( ne kinase, t... 29 4.5
AF171931-1|AAF03779.1| 787|Homo sapiens metallaproteinase-disin... 29 5.9
AF171930-1|AAF03778.1| 766|Homo sapiens metallaproteinase-disin... 29 5.9
AF171929-1|AAF03777.1| 820|Homo sapiens metallaproteinase-disin... 29 5.9
AF134708-1|AAF22163.1| 820|Homo sapiens disintegrin and metallo... 29 5.9
AC105914-1|AAY41055.1| 820|Homo sapiens unknown protein. 29 5.9
AL450426-6|CAH72414.1| 318|Homo sapiens olfactory receptor, fam... 29 7.8
AB065710-1|BAC05932.1| 318|Homo sapiens seven transmembrane hel... 29 7.8
>BC015941-1|AAH15941.1| 180|Homo sapiens nuclear import 7 homolog
(S. cerevisiae) protein.
Length = 180
Score = 145 bits (352), Expect = 4e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 1e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AF132971-1|AAD27746.1| 180|Homo sapiens CGI-37 protein protein.
Length = 180
Score = 145 bits (352), Expect = 4e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 1e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB112439-1|BAD05056.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 145 bits (352), Expect = 4e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 1e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB062479-1|BAB93504.1| 180|Homo sapiens OK/SW-CL.78 protein.
Length = 180
Score = 145 bits (352), Expect = 4e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 1e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB062398-1|BAB93485.1| 180|Homo sapiens OK/SW-cl.76 protein.
Length = 180
Score = 145 bits (352), Expect = 4e-35
Identities = 61/83 (73%), Positives = 75/83 (90%)
Frame = +2
Query: 5 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 184
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 185 ITENTPKHQGVVVLTMSDIPIGF 253
ITENT ++QGVVV +M+DIP+GF
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGF 143
Score = 54.8 bits (126), Expect = 1e-07
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +3
Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 362
+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 147 AKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AL121829-14|CAC15526.1| 488|Homo sapiens protein ( ne kinase, the
PTK6 gene for ).).
Length = 488
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 196 YTETSRCGGINDVRYSDWLCVLQE 267
Y T+RCGG VR D LC L+E
Sbjct: 60 YDFTARCGGELSVRRGDRLCALEE 83
>AF171931-1|AAF03779.1| 787|Homo sapiens
metallaproteinase-disintegrin gama protein.
Length = 787
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 PDNLVSAGTCFGKF---TKTNKFRLHITALTYISPYAPFKVWVKPSAEQQF 145
P++LVS TCFG F + N F I L + + + V+ S E+QF
Sbjct: 110 PESLVSLSTCFGGFQGILQINDFAYEIKPLAFSTTFEHL-VYKMDSEEKQF 159
>AF171930-1|AAF03778.1| 766|Homo sapiens
metallaproteinase-disintegrin beta protein.
Length = 766
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 PDNLVSAGTCFGKF---TKTNKFRLHITALTYISPYAPFKVWVKPSAEQQF 145
P++LVS TCFG F + N F I L + + + V+ S E+QF
Sbjct: 110 PESLVSLSTCFGGFQGILQINDFAYEIKPLAFSTTFEHL-VYKMDSEEKQF 159
>AF171929-1|AAF03777.1| 820|Homo sapiens
metallaproteinase-disintegrin protein.
Length = 820
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 PDNLVSAGTCFGKF---TKTNKFRLHITALTYISPYAPFKVWVKPSAEQQF 145
P++LVS TCFG F + N F I L + + + V+ S E+QF
Sbjct: 110 PESLVSLSTCFGGFQGILQINDFAYEIKPLAFSTTFEHL-VYKMDSEEKQF 159
>AF134708-1|AAF22163.1| 820|Homo sapiens disintegrin and
metalloproteinase domain 29 protein.
Length = 820
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 PDNLVSAGTCFGKF---TKTNKFRLHITALTYISPYAPFKVWVKPSAEQQF 145
P++LVS TCFG F + N F I L + + + V+ S E+QF
Sbjct: 110 PESLVSLSTCFGGFQGILQINDFAYEIKPLAFSTTFEHL-VYKMDSEEKQF 159
>AC105914-1|AAY41055.1| 820|Homo sapiens unknown protein.
Length = 820
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 2 PDNLVSAGTCFGKF---TKTNKFRLHITALTYISPYAPFKVWVKPSAEQQF 145
P++LVS TCFG F + N F I L + + + V+ S E+QF
Sbjct: 110 PESLVSLSTCFGGFQGILQINDFAYEIKPLAFSTTFEHL-VYKMDSEEKQF 159
>AL450426-6|CAH72414.1| 318|Homo sapiens olfactory receptor, family
13, subfamily C, member 5 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.8
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 236 LTSLIPPHLDVSVYFLLSGPSHF**CGVHTRTVVPQTASPTL*TAHRVICKSKL*CAT*I 57
L S++ PHL +YF L S C +T T +P T L + + I S CA +
Sbjct: 47 LISILDPHLHTPMYFFLGNLSFLDIC--YTTTSIPSTLVSFL-SERKTISLSG--CAVQM 101
Query: 56 YLSL 45
+LSL
Sbjct: 102 FLSL 105
>AB065710-1|BAC05932.1| 318|Homo sapiens seven transmembrane helix
receptor protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.8
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -3
Query: 236 LTSLIPPHLDVSVYFLLSGPSHF**CGVHTRTVVPQTASPTL*TAHRVICKSKL*CAT*I 57
L S++ PHL +YF L S C +T T +P T L + + I S CA +
Sbjct: 47 LISILDPHLHTPMYFFLGNLSFLDIC--YTTTSIPSTLVSFL-SERKTISLSG--CAVQM 101
Query: 56 YLSL 45
+LSL
Sbjct: 102 FLSL 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,809,881
Number of Sequences: 237096
Number of extensions: 1359160
Number of successful extensions: 2587
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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