Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1003
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075367-1|AAL68214.1|  180|Drosophila melanogaster GM12126p pro...   132   2e-31
AE014297-3645|AAF56348.1|  180|Drosophila melanogaster CG7006-PA...   132   2e-31
AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH1077...    27   7.2  
AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA...    27   7.2  
AY058675-1|AAL13904.1|  772|Drosophila melanogaster LD38495p pro...    27   9.5  
AE014297-2112|AAF55252.2|  772|Drosophila melanogaster CG4221-PA...    27   9.5  
AE014134-1997|AAF53040.1|  539|Drosophila melanogaster CG6093-PA...    27   9.5  

>AY075367-1|AAL68214.1|  180|Drosophila melanogaster GM12126p
           protein.
          Length = 180

 Score =  132 bits (319), Expect = 2e-31
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = +2

Query: 11  LVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRIT 190
           LV  GTCFGKF+KTNK + HITAL Y++PYA +KVWVKPS EQQFLYG+HI K+GLGRIT
Sbjct: 63  LVCVGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVKPSFEQQFLYGNHIPKTGLGRIT 122

Query: 191 ENTPKHQGVVVLTMSDIPIGF 253
           EN  ++QGVVV +M+D+P+GF
Sbjct: 123 ENAGQYQGVVVYSMNDLPLGF 143



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +3

Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
           +R+T +C+ ADP+ T+ FHQ+D+GEYIR+EDTL
Sbjct: 147 ARSTTDCKTADPMTTVCFHQSDIGEYIRAEDTL 179


>AE014297-3645|AAF56348.1|  180|Drosophila melanogaster CG7006-PA
           protein.
          Length = 180

 Score =  132 bits (319), Expect = 2e-31
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = +2

Query: 11  LVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGRIT 190
           LV  GTCFGKF+KTNK + HITAL Y++PYA +KVWVKPS EQQFLYG+HI K+GLGRIT
Sbjct: 63  LVCVGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVKPSFEQQFLYGNHIPKTGLGRIT 122

Query: 191 ENTPKHQGVVVLTMSDIPIGF 253
           EN  ++QGVVV +M+D+P+GF
Sbjct: 123 ENAGQYQGVVVYSMNDLPLGF 143



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +3

Query: 261 SRTTAECRHADPLATIVFHQADVGEYIRSEDTL 359
           +R+T +C+ ADP+ T+ FHQ+D+GEYIR+EDTL
Sbjct: 147 ARSTTDCKTADPMTTVCFHQSDIGEYIRAEDTL 179


>AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH10777
           protein.
          Length = 1073

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 122 KPSAEQQFLYGHHIIKSGLGRITENTPKHQGVVV 223
           K ++ +QF Y   +  S  G    N  KH+GVVV
Sbjct: 500 KSTSSKQFAYNKLVNDSATGLQRRNAVKHKGVVV 533


>AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA
           protein.
          Length = 1073

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 122 KPSAEQQFLYGHHIIKSGLGRITENTPKHQGVVV 223
           K ++ +QF Y   +  S  G    N  KH+GVVV
Sbjct: 500 KSTSSKQFAYNKLVNDSATGLQRRNAVKHKGVVV 533


>AY058675-1|AAL13904.1|  772|Drosophila melanogaster LD38495p
           protein.
          Length = 772

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 351 PQSVYILLRRPGGRQSSPKDQRVDILPSFLKYAKPIGISDIVNTTTP*CFGVFSVIR 181
           PQ VY+ LRR         D  +  +PSF    K + +SD +N T    FG++ + +
Sbjct: 580 PQLVYLYLRRC----IQVTDAGLKFVPSFCVSLKELSVSDCLNITD---FGLYELAK 629


>AE014297-2112|AAF55252.2|  772|Drosophila melanogaster CG4221-PA
           protein.
          Length = 772

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 351 PQSVYILLRRPGGRQSSPKDQRVDILPSFLKYAKPIGISDIVNTTTP*CFGVFSVIR 181
           PQ VY+ LRR         D  +  +PSF    K + +SD +N T    FG++ + +
Sbjct: 580 PQLVYLYLRRC----IQVTDAGLKFVPSFCVSLKELSVSDCLNITD---FGLYELAK 629


>AE014134-1997|AAF53040.1|  539|Drosophila melanogaster CG6093-PA
           protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 44  TKTNKFRLHITALTYISPYAP 106
           T + KFRLH TA  +++P AP
Sbjct: 479 TDSIKFRLHATARRHLNPLAP 499


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,927,529
Number of Sequences: 53049
Number of extensions: 413810
Number of successful extensions: 1169
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)