Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1002
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 142 5e-35
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 121 1e-28
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 113 2e-26
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 105 8e-24
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 98 1e-21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 87 2e-18
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 76 6e-15
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 2e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.010
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 29 0.88
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.7
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.7
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 6.2
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.2
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.2
SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23... 25 8.2
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 8.2
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 142 bits (344), Expect = 5e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Frame = +3
Query: 192 GLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 371
G F PQF + NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 372 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKR 509
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T R
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRAR 153
Score = 103 bits (246), Expect = 3e-23
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +1
Query: 64 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 243
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 244 FTNQTALG 267
FT G
Sbjct: 65 FTRGNGTG 72
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 121 bits (291), Expect = 1e-28
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = +3
Query: 189 QGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 368
+G F P F + + +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 369 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 470
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 97.9 bits (233), Expect = 1e-21
Identities = 46/79 (58%), Positives = 52/79 (65%)
Frame = +1
Query: 31 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 210
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 211 VIPNFMLQGGDFTNQTALG 267
VIPNFM+QGGD T G
Sbjct: 79 VIPNFMIQGGDITKGDGTG 97
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 113 bits (273), Expect = 2e-26
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG
Sbjct: 74 NGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFG 133
Query: 435 NVVEGMEVVKQIETFGSQS 491
V++G V+ IE +++
Sbjct: 134 KVIQGKSTVRTIENLETKN 152
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +1
Query: 64 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 231
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 232 QGGDFTNQTALG 267
QGGDFT G
Sbjct: 66 QGGDFTRGNGTG 77
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 105 bits (251), Expect = 8e-24
Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 NGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 431
+GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVF
Sbjct: 78 DGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVF 137
Query: 432 GNVVEGMEVVKQIET 476
G V+EG ++VK+IE+
Sbjct: 138 GEVIEGYDIVKEIES 152
Score = 80.6 bits (190), Expect = 2e-16
Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = +1
Query: 55 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 216
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 217 PNFMLQGGDFTNQTALGES 273
FM+QGGDF + G +
Sbjct: 65 QGFMIQGGDFVSGDGTGSA 83
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 97.9 bits (233), Expect = 1e-21
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
G GG SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG
Sbjct: 61 GRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFG 120
Query: 435 NVVEGMEVVKQI 470
VV G+ V K++
Sbjct: 121 RVVSGLSVCKRM 132
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 94 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G S
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGTS 66
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 87.4 bits (207), Expect = 2e-18
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 431
+GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F
Sbjct: 513 DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIF 572
Query: 432 GNVVEGMEVVKQIE 473
G++VV +IE
Sbjct: 573 ARAYAGLDVVHRIE 586
Score = 47.2 bits (107), Expect = 2e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD GES
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLGDGTGGES 519
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 75.8 bits (178), Expect = 6e-15
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +3
Query: 252 PNGTG--GKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 422
P+GTG G+SI+G F+DE LKH G++SMAN G +TNGSQFFI LD +H
Sbjct: 331 PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKH 390
Query: 423 VVFGNVVEGMEVVKQIETFGSQSGKTSK 506
+FG VV G+ V+ +E + S K
Sbjct: 391 TIFGRVVGGLNVLDALEKVPTNSNDHPK 418
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGDPSGTGRGGQS 340
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T GES
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGGES 77
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 258 GTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
G GG+SIYG F E L+ G++ MA + N SQFFIT T +G+ +FG
Sbjct: 72 GMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFG 131
Query: 435 NVV 443
VV
Sbjct: 132 RVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 35.1 bits (77), Expect = 0.010
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +1
Query: 85 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTAL 264
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD T
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 265 G 267
G
Sbjct: 63 G 63
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 211 VIPNFMLQGGDFTNQTALGESPSTAISLKTRISPLSTLDLASSP 342
V+ + G DF N L SP T+++L+ R S LS+ S+P
Sbjct: 76 VMETYYPHGQDF-NDALLVASPDTSVALRYRSSQLSSSTFESTP 118
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 73 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 168
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 496 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 410
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 368 WFPVLHHHC 394
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 463 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 314
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 511 DLLEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLT 392
DLLE F +LP VS+ + P+ T K+T +P T
Sbjct: 403 DLLEEFKRFLPDVSV----NAPAETQDKSTVVPQESATAT 438
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 481 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 302
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 301 SSSNL 287
SSS++
Sbjct: 222 SSSSI 226
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -1
Query: 249 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 70
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 69 EEYS 58
E++S
Sbjct: 937 EDHS 940
>SPBC646.13 |sds23|psp1, moc1|inducer of sexual development
Sds23/Moc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 377 LGTISISTGISHGEDARSS--VLKGEILVFKLIAVDGLSPSAVWLVKSPPC 231
L I GI G+D+ + + + F L + +WLV+SP C
Sbjct: 280 LSVIKSEQGIRAGKDSAPAFNIYESSTFAFTLAKLVATQCHRLWLVQSPSC 330
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.2
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -2
Query: 452 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 291
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 290 LIAVDGLSPS 261
LSPS
Sbjct: 287 KFLHHSLSPS 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,160,677
Number of Sequences: 5004
Number of extensions: 68024
Number of successful extensions: 237
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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