Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1002
(720 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 149 1e-36
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 149 1e-36
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 148 4e-36
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 142 2e-34
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 140 8e-34
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 140 8e-34
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 140 1e-33
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 134 7e-32
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 133 1e-31
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 132 2e-31
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 116 1e-26
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 116 1e-26
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 111 3e-25
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 107 7e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 102 3e-22
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 101 5e-22
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 101 6e-22
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 87 8e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 81 7e-16
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 1e-15
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 74 8e-14
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 56 3e-08
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 4e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 41 0.001
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 36 0.020
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 34 0.082
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 34 0.082
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 34 0.082
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.58
At4g28410.1 68417.m04067 aminotransferase-related similar to nic... 30 1.8
At1g50520.1 68414.m05667 cytochrome P450 family protein similar ... 29 3.1
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.2
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 9.5
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.5
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.5
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.5
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 27 9.5
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.5
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 149 bits (362), Expect = 1e-36
Identities = 71/109 (65%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 506
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 104 bits (249), Expect = 7e-23
Identities = 49/81 (60%), Positives = 59/81 (72%), Gaps = 7/81 (8%)
Frame = +1
Query: 46 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 204
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 205 HRVIPNFMLQGGDFTNQTALG 267
HRVIPNFM QGGDFT G
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTG 81
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 149 bits (362), Expect = 1e-36
Identities = 71/109 (65%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F + NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 506
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 106 bits (254), Expect = 2e-23
Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 7/80 (8%)
Frame = +1
Query: 49 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 207
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 208 RVIPNFMLQGGDFTNQTALG 267
RVIPNFM QGGDFT G
Sbjct: 63 RVIPNFMCQGGDFTKGNGTG 82
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 148 bits (358), Expect = 4e-36
Identities = 70/109 (64%), Positives = 81/109 (74%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P+F NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 506
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS SG+TSK
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSK 162
Score = 95.5 bits (227), Expect = 3e-20
Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Frame = +1
Query: 55 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 213
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 214 IPNFMLQGGDFTNQTALG 267
IP FM QGGDFT G
Sbjct: 65 IPKFMCQGGDFTAGNGTG 82
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 142 bits (344), Expect = 2e-34
Identities = 69/105 (65%), Positives = 75/105 (71%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 494
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G QSG
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG 185
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 216
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 217 PNFMLQGGDFTNQTALG 267
P+FM+QGGDFT+ +G
Sbjct: 93 PSFMIQGGDFTHGNGMG 109
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 140 bits (339), Expect = 8e-34
Identities = 68/105 (64%), Positives = 74/105 (70%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 494
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G+QSG
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSG 188
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 216
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 217 PNFMLQGGDFTNQTALG 267
P+FMLQGGDFT+ +G
Sbjct: 96 PSFMLQGGDFTHGNGMG 112
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 140 bits (339), Expect = 8e-34
Identities = 67/110 (60%), Positives = 78/110 (70%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F + NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKR 509
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E GS G S+R
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSER 162
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Frame = +1
Query: 46 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 204
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 205 HRVIPNFMLQGGDFTNQTALG 267
HR+IP FM QGGDFT G
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTG 81
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 140 bits (338), Expect = 1e-33
Identities = 68/109 (62%), Positives = 78/109 (71%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 506
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE GS SGKTSK
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSK 161
Score = 102 bits (245), Expect = 2e-22
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Frame = +1
Query: 46 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 204
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 205 HRVIPNFMLQGGDFTNQTALG 267
HRVIP FM QGGDFT + G
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTG 81
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 134 bits (323), Expect = 7e-32
Identities = 60/87 (68%), Positives = 69/87 (79%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG
Sbjct: 160 NGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFG 219
Query: 435 NVVEGMEVVKQIETFGSQSGKTSKRSL 515
V+EGMEVVK IE + G ++ +
Sbjct: 220 QVIEGMEVVKLIEEQETDRGDRPRKKV 246
Score = 91.1 bits (216), Expect = 7e-19
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 225
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 226 MLQGGDFTNQTALG 267
M+QGGDF G
Sbjct: 150 MIQGGDFEKGNGTG 163
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 133 bits (321), Expect = 1e-31
Identities = 64/105 (60%), Positives = 74/105 (70%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F P F + +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 494
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G SG
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSG 212
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 216
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 217 PNFMLQGGDFTNQTALG 267
P FM+QGGDFT G
Sbjct: 120 PGFMIQGGDFTRGDGRG 136
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 132 bits (319), Expect = 2e-31
Identities = 58/74 (78%), Positives = 67/74 (90%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG
Sbjct: 162 NGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFG 221
Query: 435 NVVEGMEVVKQIET 476
V+EGM++V+ +E+
Sbjct: 222 QVIEGMKLVRTLES 235
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 237
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 238 GDFTNQTALG 267
GDFT G
Sbjct: 156 GDFTEGNGTG 165
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 116 bits (280), Expect = 1e-26
Identities = 58/106 (54%), Positives = 67/106 (63%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F F A NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 497
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ GK
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Frame = +1
Query: 43 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 198
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 199 IFHRVIPNFMLQGGDFTNQTALG 267
FHRVI FM QGGDF+N G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 116 bits (280), Expect = 1e-26
Identities = 58/106 (54%), Positives = 67/106 (63%)
Frame = +3
Query: 180 LRLQGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 359
L +G F F A NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 360 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 497
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ GK
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Frame = +1
Query: 43 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 198
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 199 IFHRVIPNFMLQGGDFTNQTALG 267
FHRVI FM QGGDF+N G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 111 bits (268), Expect = 3e-25
Identities = 51/73 (69%), Positives = 61/73 (83%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
+GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG
Sbjct: 79 DGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFG 138
Query: 435 NVVEGMEVVKQIE 473
V +GM VV+ IE
Sbjct: 139 RVTKGMGVVRSIE 151
Score = 81.4 bits (192), Expect = 5e-16
Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Frame = +1
Query: 46 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 201
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 202 FHRVIPNFMLQGGDFT-NQTALGES 273
FHRVI FM+QGGD + N GES
Sbjct: 61 FHRVIKGFMIQGGDISANDGTGGES 85
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 107 bits (257), Expect = 7e-24
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
+G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG
Sbjct: 104 DGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFG 163
Query: 435 NVV-EGMEVVKQIE 473
V+ +G+ V+++IE
Sbjct: 164 RVLGDGLLVMRKIE 177
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Frame = +1
Query: 55 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 219
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 220 NFMLQGGDFTNQTALG 267
+FM+Q GDF G
Sbjct: 92 DFMVQSGDFLKNDGSG 107
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 102 bits (244), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 431
+GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VF
Sbjct: 534 DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVF 593
Query: 432 GNVVEGMEVVKQIE 473
G VV+GM+VV+ IE
Sbjct: 594 GRVVKGMDVVQGIE 607
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/85 (35%), Positives = 42/85 (49%)
Frame = +1
Query: 19 IAYIANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGS 198
++ I N+ SLP + + LG I ++L + PKT ENF C G+ Y
Sbjct: 463 VSDIGNSATTSLP----ENVIMHTTLGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNH 515
Query: 199 IFHRVIPNFMLQGGDFTNQTALGES 273
+FHRVI FM+Q GD G+S
Sbjct: 516 LFHRVIRGFMIQTGDPLGDGTGGQS 540
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 101 bits (242), Expect = 5e-22
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG
Sbjct: 69 GRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFG 128
Query: 435 NVVEGMEVVKQI 470
V GMEV+K++
Sbjct: 129 RVCRGMEVIKRL 140
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +1
Query: 70 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 249
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 250 NQTALGES 273
GES
Sbjct: 67 GTGRGGES 74
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 101 bits (241), Expect = 6e-22
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
+G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G
Sbjct: 121 DGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLG 180
Query: 435 NVVEGMEVVKQIE-TFGSQSGKTSKR 509
V++GM+ V IE G+ SGK K+
Sbjct: 181 KVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 216
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 217 PNFMLQGGD 243
F++QGGD
Sbjct: 108 SGFVIQGGD 116
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = +1
Query: 46 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 204
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 205 HRVIPNFMLQGGD 243
++P+ M GGD
Sbjct: 61 DHIVPDLMWCGGD 73
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 276 IYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEG 449
I+ + +DE F L H GPG++SMA D+NGSQF I +DG HVV G VVEG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 450 MEVVKQIETFGSQSGKTSKRSLSKTVV 530
+++++ IE + T+ R+ SK VV
Sbjct: 137 LDLMRNIE---KEVITTTTRTPSKPVV 160
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 81.0 bits (191), Expect = 7e-16
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +1
Query: 43 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 198
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 199 IFHRVIPNFMLQGGDFTNQT-ALGES 273
FHR++ Q GDF N+ GES
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGES 88
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVFG
Sbjct: 82 NGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFG 141
Query: 435 NVVEGMEVVKQIETFGSQSGK 497
+++G E++K+IE G + GK
Sbjct: 142 KLIQGKEILKKIERVGDEEGK 162
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 258 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG
Sbjct: 60 GKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFG 119
Query: 435 NVVEGMEVVKQIE 473
V+ G EV+ +E
Sbjct: 120 KVIHGFEVLDIME 132
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +1
Query: 94 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 243
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD 55
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 258 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 434
G GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG
Sbjct: 403 GKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFG 462
Query: 435 NVVEGMEVVKQIE 473
VV G+ + +E
Sbjct: 463 GVVGGLATLAAME 475
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T GES
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTGTGKGGES 408
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 255 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVV 428
+GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +
Sbjct: 71 SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTI 130
Query: 429 FGNV 440
FG V
Sbjct: 131 FGKV 134
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T G+S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTGSGTGGDS 77
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 55.6 bits (128), Expect = 3e-08
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Frame = +3
Query: 156 CPVHWRERLRLQGL-HFPSCHPQFHAARRGLH----QPNGTGG------KSIYGNK---F 293
CP+ + L+L + ++ C FH ++ P GTG K +YG + +
Sbjct: 21 CPLTCKNFLKLCKIKYYNGC--LFHTVQKDFTAQTGDPTGTGAGGDSIYKFLYGEQARFY 78
Query: 294 EDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQ 467
+DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +
Sbjct: 79 KDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTR 138
Query: 468 I 470
I
Sbjct: 139 I 139
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = +1
Query: 94 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTALGES 273
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q GD T A G+S
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDS 65
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 58 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 237
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 238 G 240
G
Sbjct: 153 G 153
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 366 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 503
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 85 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 243
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q GD
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGD 132
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 309 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 473
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +1
Query: 82 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNQTA 261
D PLG++V+ L P T F+ +CT YK + H++ P G +
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAG----RQG 135
Query: 262 LGESPSTAISLKTRISPLSTLDLASSPWLMP 354
G + + R P +T + S +L+P
Sbjct: 136 GGRRDTAEVGYSLRDLPRNTDVVNSKAFLLP 166
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 360 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 476
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 240
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 375 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 473
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 240
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 375 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 473
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 97 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 240
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 375 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 473
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.58
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 472 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 293
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At4g28410.1 68417.m04067 aminotransferase-related similar to
nicotianamine aminotransferase [Hordeum vulgare subsp.
vulgare] GI:6469090
Length = 447
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 226 MLQGGDFTNQTALGESPSTAISLKTRISPLSTLDLASSPWLMP 354
M+ + NQT GE+ + + + I+P+ TL S WL+P
Sbjct: 241 MVISDEVYNQTIYGENKFVPMGIFSSITPVVTLGSISKGWLVP 283
>At1g50520.1 68414.m05667 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 GB:O81973 from [Glycine max]
Length = 533
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 154 RALCTGEK-GFGYKGSIFHRVIPNF-MLQGGDFTNQTALGESPST-AISLK----TRISP 312
R C GEK G+ + G ++ F + GD N GE T A LK TR++P
Sbjct: 454 RRACPGEKLGYLFTGVAIGTMVQCFDWIIDGDKVNVEEAGEMTLTMAHPLKCTPVTRVNP 513
Query: 313 LSTLDLASSPWLM 351
L++ + WLM
Sbjct: 514 LASFESEDPKWLM 526
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 29 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 154
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 440 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 312
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 388 VMKNWEPLVSAPALAMERTPGPVCLR 311
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 388 VMKNWEPLVSAPALAMERTPGPVCLR 311
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 433 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 266
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 294 EDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 464
E+E KH+ L + A +G DTNG FF KT+ +VF N + EVV+
Sbjct: 536 EEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVE 593
Query: 465 QIETFGSQ 488
+++ Q
Sbjct: 594 KLQRADEQ 601
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 388 VMKNWEPLVSAPALAMERTPGPVCLR 311
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,770,660
Number of Sequences: 28952
Number of extensions: 376365
Number of successful extensions: 1069
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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