Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0994
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 35 0.054
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 35 0.054
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 34 0.093
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 32 0.38
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 31 0.50
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 31 0.87
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 31 0.87
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 31 0.87
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 31 0.87
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 30 1.2
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 29 3.5
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 3.5
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 3.5
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 29 3.5
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 29 3.5
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 28 4.6
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 28 4.6
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 28 6.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 27 8.1
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 27 8.1
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 346 DNEKTCVACLEEILQPCVLQCGHIFCHQCC*AH 248
D + C CL+ ++PC+++CGH +C C +H
Sbjct: 3 DEDFCCAVCLDFFVEPCIIECGHSYCRFCIESH 35
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.023
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 340 EKTCVACLEEILQPCVLQCGHIFCHQC 260
E+ C C ++LQP L+C H+FC C
Sbjct: 334 EQPCAVCHGDLLQPIKLECTHVFCKFC 360
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 388 KKHLDQLKEIPNEVDNEKTCVACLEEIL----QPCVLQCGHIFCHQC 260
K + ++ I DN ++C C +E Q VLQCGH FC +C
Sbjct: 44 KNEMSRIDIIREAADNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRC 90
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.054
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 352 EVDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
+++ TC CL+ QP +L C H FC+ C
Sbjct: 36 KIEQLLTCPICLDRYKQPKLLPCQHTFCYPC 66
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.054
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 352 EVDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
+++ TC CL+ QP +L C H FC+ C
Sbjct: 36 KIEQLLTCPICLDRYKQPKLLPCQHTFCYPC 66
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 331 CVACLEEILQPCVLQCGHIFCHQCC 257
C CL+ QP LQCGH C CC
Sbjct: 110 CPHCLQIFEQPISLQCGHSLCLICC 134
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 355 NEVDNEKT-CVACLEEILQPCVLQCGHIFCHQC 260
N++D + C C + I++P L+C H FC +C
Sbjct: 91 NDLDEDDVLCTICYDIIVEPHTLRCQHSFCKKC 123
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 385 KHLDQLKEIPNEVDNEKTCVACLEEILQ--PCVLQCGHIFCHQC 260
K LD+ +V+ + C CL I Q P L CGH FCH+C
Sbjct: 23 KSLDEADVCVVDVETLR-CAVCLN-IFQGIPQTLTCGHSFCHRC 64
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 349 VDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
++ E C C+ P +L CGH C C
Sbjct: 1 MEEELKCTICIRFFEDPIILTCGHSLCRMC 30
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 331 CVACLEEILQPCVLQCGHIFCHQC 260
C CL P + CGHIFC +C
Sbjct: 105 CPICLANASFPVLTDCGHIFCCEC 128
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 30.7 bits (66), Expect = 0.87
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 331 CVACLEEILQPCVLQCGHIFCHQCC*AH 248
C CLE P L CGH+FC C H
Sbjct: 255 CSICLEN-KNPSALFCGHLFCWTCIQEH 281
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -3
Query: 376 DQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCC*AH 248
D + + ++ +E C C + +P ++ CGH +C C H
Sbjct: 41 DVQQPVRRDLSSELLCPLCDQLFDRPVMVTCGHSYCEPCIERH 83
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 340 EKTCVACLEEILQPCVL-QCGHIFCHQC 260
+K C C E++ P + CGH FC C
Sbjct: 21 DKECAVCYSEMILPTTIPSCGHKFCFIC 48
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -3
Query: 376 DQLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQCC*AH 248
D + + ++ +E C C + +P ++ CGH +C C H
Sbjct: 41 DVQQPVRRDLSSELLCPLCDQLFDRPVMVTCGHSYCEPCIERH 83
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 334 TCVACLEEILQPCVLQCGHIFCHQC 260
TC C + + P L C H +C QC
Sbjct: 17 TCPICEQALRDPIKLNCDHHYCRQC 41
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = -3
Query: 334 TCVACLEEI----LQPCVLQCGHIFCHQC 260
TC+ C+ E +P VL CGH C +C
Sbjct: 14 TCLICIREFDTKTRKPKVLHCGHTVCEEC 42
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 334 TCVACLEEILQPCVLQCGHIFCHQC 260
TC C + + P L C H +C QC
Sbjct: 17 TCPICEQALRDPIKLNCDHHYCRQC 41
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -3
Query: 343 NEKTCVACLEE----ILQPCVLQCGHIFCHQC 260
N C+ C E + +PC+ CGH C C
Sbjct: 5 NTTECIICYNEYDTELRKPCIGTCGHSICESC 36
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 301 PCVLQCGHIFCHQC 260
P VL CGH CH+C
Sbjct: 198 PRVLDCGHTICHEC 211
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 373 QLKEIPNEVDNEKTCVACL----EEILQPCVLQCGHIFCHQC 260
+L E + ++ K C C E P V+ CGH CH C
Sbjct: 176 KLTESNAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTC 217
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 370 LKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
L+E ++ TC +C +L+C H+FC C
Sbjct: 769 LEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETC 805
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 370 LKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
L+E ++ TC +C +L+C H+FC C
Sbjct: 772 LEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETC 808
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = -3
Query: 346 DNEKTCVACLE----EILQPCVLQCGHIFCHQC 260
D+ TC C E E P +L CGH FC C
Sbjct: 19 DSLITCEVCFEVFNHENRPPKLLPCGHNFCESC 51
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -3
Query: 385 KHLDQLKEIPNEVDNEKTCVACLEEILQ----PCVLQCGHIFCHQCC*AH 248
+++D ++++ + + + TC C+EE P VL CGH FC C H
Sbjct: 10 QNVDIIRDV--KFNMKPTCSICMEEFDANSHIPKVLICGHSFCIICIEKH 57
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -3
Query: 373 QLKEIPNEVDNEKTCVACLEEILQPCVLQCGHIFCHQC 260
++ E + E C C P + C HIFC C
Sbjct: 7 RITETVARLQKELKCGICCSTYKDPILSTCFHIFCRSC 44
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 331 CVACLEEILQPCVLQCGHIFCHQC 260
C CL+ V CGH+FC C
Sbjct: 26 CNICLDAAKDAVVSLCGHLFCWPC 49
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 388 KKHLDQLKEIPNEVDNEKTCVACLEEILQ 302
KK ++ KE ++VDNE + + CL+++ Q
Sbjct: 526 KKLINGRKEFADKVDNELSVIKCLQQLKQ 554
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 451 FTRLHNITACICMLWQSVYXAKKHL 377
F R H+ + C +W++VY AK HL
Sbjct: 612 FYRFHS-SVCFAEIWKNVYAAKTHL 635
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -3
Query: 361 IPNEVDNEKTCVACLEEI----LQPCVLQCGHIFCHQC 260
+PN VD + C CLE+ +PCV CGH C +C
Sbjct: 2 LPN-VDFSR-CPTCLEDYDDNSHRPCVGFCGHSICLKC 37
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -3
Query: 334 TCVACLEEILQPCVL--QCGHIFCHQC 260
+C C +E++Q ++ +CGH FC QC
Sbjct: 161 SCDVC-QELIQGSIMTKKCGHRFCDQC 186
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 301 PCVLQCGHIFCHQC 260
P V++CGH CH C
Sbjct: 190 PRVMKCGHTICHTC 203
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 301 PCVLQCGHIFCHQC 260
P V++CGH CH C
Sbjct: 190 PRVMKCGHTICHTC 203
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -3
Query: 388 KKHLDQLKEIPNEVDNEKTCVACLEEI-----LQPCVLQCGHIFCHQC 260
K+ + + ++ VD+E C C E+ P V CGH +C C
Sbjct: 121 KEQIKKRYQLDEYVDDE--CKICFEKYEVTGNRSPRVFNCGHTYCESC 166
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 319 LEEILQPCVLQCGHIFCHQC 260
L+E P VL+CGH C C
Sbjct: 16 LDESRAPRVLKCGHSICQNC 35
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 319 LEEILQPCVLQCGHIFCHQC 260
L ++ P +L+CGH CH C
Sbjct: 16 LTDVNIPRILRCGHTTCHGC 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,644,784
Number of Sequences: 27780
Number of extensions: 290736
Number of successful extensions: 873
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -