Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0992
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.43 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 66  MKPETNDSDKKIRSHQRTPSGSRDFKEATKRDALARLEVELEK 194
           + P++   +K + +   TP  S + K    +D L RLE+ LEK
Sbjct: 115 VSPKSEKEEKDMET-TLTPCASPNRKPDDNQDHLRRLEMSLEK 156


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 186 APPPVERGHHVWWPP*SHETL 124
           AP PVE  H VW P  S++ +
Sbjct: 59  APKPVEPWHGVWKPDASYKCM 79


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 186 APPPVERGHHVWWPP*SHETL 124
           AP PVE  H VW P  S++ +
Sbjct: 59  APKPVEPWHGVWKPDASYKCM 79


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 186 APPPVERGHHVWWPP*SHETL 124
           AP PVE  H VW P  S++ +
Sbjct: 59  APKPVEPWHGVWKPDASYKCM 79


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 186 APPPVERGHHVWWPP*SHETL 124
           AP PVE  H VW P  S++ +
Sbjct: 59  APKPVEPWHGVWKPDASYKCM 79


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 186 APPPVERGHHVWWPP*SHETL 124
           AP PVE  H VW P  S++ +
Sbjct: 59  APKPVEPWHGVWKPDASYKCM 79


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 72  PETNDSDKKIRSHQRTPSGSRDFKEATKRDALARLEVELEK 194
           P+T+ SD +I ++         +K  T  DAL   E+  EK
Sbjct: 402 PKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEK 442


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 72  PETNDSDKKIRSHQRTPSGSRDFKEATKRDALARLEVELEK 194
           P+T+ SD +I ++         +K  T  DAL   E+  EK
Sbjct: 294 PKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEK 334


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 85  TPIKRFAVTSGRR 123
           TP++ F +T GRR
Sbjct: 331 TPLEVFTITPGRR 343


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 85  TPIKRFAVTSGRR 123
           TP++ F +T GRR
Sbjct: 331 TPLEVFTITPGRR 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,815
Number of Sequences: 336
Number of extensions: 2218
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)