Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0992
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.2  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   2.8  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   5.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.6  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   8.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 200 DELLQLHLQSSEGITFGGLLEVTRP*RRPLVTANLF 93
           DE+ +L+ ++ E  T    LEVT+     L+T NLF
Sbjct: 802 DEIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLF 837


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 174  LEVELEKLISTAPETRRPQLEKEFKGFRRSSADS 275
            L   ++KL+ T P      +E EFK      ADS
Sbjct: 944  LHNHIQKLMQTEPHENITGMEMEFKKLSNVKADS 977


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 81  NDSDKKIRSHQRTPSGSRDFKEATKRDALARLEVELEKLISTAPE 215
           NDS   + SH +  S        ++  + A    +L K IS AP+
Sbjct: 846 NDSTNDLLSHNKVSSLHGSCDSLSRNVSQASSTSDLSKTISVAPD 890


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 63   EMKPETNDSDKKIRSHQRTPSGSRDFKEATK 155
            +M  +TN +   +R+   T +GSRD K  +K
Sbjct: 2805 QMGMQTNRTGADLRAGSLTFTGSRDAKRPSK 2835


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 319 LLDFLPCYRRTLFSQESAEERLKPLNSFSSCGRLVSGA 206
           ++DF+    RTL  Q+S  E   PL+  +    L  G+
Sbjct: 92  VVDFMMRISRTLPQQQSRTELFSPLSIITVANLLFLGS 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,714
Number of Sequences: 2352
Number of extensions: 9409
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)