Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0985
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.5  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 329 LLFYYGLCPYXIYLHMYTIQHLKY 400
           LLFY   C   I  H+Y++  L Y
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSY 38


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 329 LLFYYGLCPYXIYLHMYTIQHLKY 400
           LLFY   C   I  H+Y++  L Y
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSY 38


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = +2

Query: 299 FLFTYLIKIPLLFYYGLCPYXIYLHMYTIQHL 394
           F+FT++  + +  Y+ LC +      ++++HL
Sbjct: 447 FIFTFITLLTIGLYFQLCEFSRL--NFSVEHL 476


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 174 NTTCIPITSHYFYVHS*AKSYPTKHQAFYISRIMLINKS 58
           NTT   +T    Y+    +S+P   Q   I   M  N+S
Sbjct: 455 NTTLQNLTPQLNYISMKLQSFPLLSQRHQIDAKMFCNES 493


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 179 GKTPRVYR*HLTISMYTL 126
           G+ PR+   H T+ +YT+
Sbjct: 115 GEPPRICYYHFTLELYTV 132


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 179 GKTPRVYR*HLTISMYTL 126
           G+ PR+   H T+ +YT+
Sbjct: 115 GEPPRICYYHFTLELYTV 132


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 364 IFTHVYYTTFKIFLEIL 414
           +F  V YTT+ IFL ++
Sbjct: 238 LFVGVIYTTYTIFLLLI 254


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 311 YLIKIPLLFYYGLCPYXIYLHMYTIQHLKYF*KF 412
           Y++ +    YY    Y  + H YT+  ++ + +F
Sbjct: 111 YVLTLCYAVYYWRQQYEDFWHRYTLSFIENYCQF 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,625
Number of Sequences: 336
Number of extensions: 2564
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)