Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0985
         (520 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)          27   7.0  
SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.0  

>SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)
          Length = 922

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 161 IHVVFYHTQRNT*LRYTHVKCAN*TWSANDKQITTAS 271
           I+V+F H +RNT   Y     AN T  +N  ++T  S
Sbjct: 757 IYVIFKHPERNT-AEYVKTIVANHTMRSNFSRVTVCS 792


>SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 547

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 70  KHYSTNVKRLVFGRVALCLRVYIEIVRCYRYTRGVLPYTKEHIIKVY 210
           K +  N KR    R+ L   +Y+ +  C+RYTR VL Y K   I ++
Sbjct: 24  KDFKDNGKRQSGVRICLAFGLYVVLHICHRYTR-VL-YLKRSEINLF 68


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,144,594
Number of Sequences: 59808
Number of extensions: 275920
Number of successful extensions: 689
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)