Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0985
         (520 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC119717-1|AAI19718.1|  438|Homo sapiens C1orf67 protein protein.      29   9.8  
BC119716-1|AAI19717.1|  438|Homo sapiens C1orf67 protein protein.      29   9.8  
AL590547-1|CAH73045.1|  430|Homo sapiens chromosome 1 open readi...    29   9.8  

>BC119717-1|AAI19718.1|  438|Homo sapiens C1orf67 protein protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 233 TWSANDKQITTASFLAGLPEPLFLFTYLIKIPLLFYYGLCPYXIYLHMY 379
           TW  N K+I T    + L   LFL   L +  L++  GLC   I L  Y
Sbjct: 248 TWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCEDAINLKNY 296


>BC119716-1|AAI19717.1|  438|Homo sapiens C1orf67 protein protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 233 TWSANDKQITTASFLAGLPEPLFLFTYLIKIPLLFYYGLCPYXIYLHMY 379
           TW  N K+I T    + L   LFL   L +  L++  GLC   I L  Y
Sbjct: 248 TWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCEDAINLKNY 296


>AL590547-1|CAH73045.1|  430|Homo sapiens chromosome 1 open reading
           frame 67 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 233 TWSANDKQITTASFLAGLPEPLFLFTYLIKIPLLFYYGLCPYXIYLHMY 379
           TW  N K+I T    + L   LFL   L +  L++  GLC   I L  Y
Sbjct: 240 TWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRGLCEDAINLKNY 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,670,776
Number of Sequences: 237096
Number of extensions: 1355466
Number of successful extensions: 5356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5356
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)