Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0984
(561 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 118 1e-25
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 114 2e-24
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 98 1e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 97 2e-19
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 95 8e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 95 1e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 93 3e-18
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 93 5e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 93 5e-18
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 92 9e-18
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 92 9e-18
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 91 1e-17
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 91 1e-17
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 91 1e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 91 2e-17
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 90 3e-17
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 90 3e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 9e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 88 2e-16
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 86 6e-16
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 86 6e-16
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 84 2e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 83 3e-15
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 83 6e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 83 6e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 83 6e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 83 6e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 81 2e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 75 9e-13
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 75 1e-12
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 74 2e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 74 2e-12
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 71 2e-11
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 70 4e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 66 4e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 9e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 64 2e-09
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 62 9e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 59 6e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 55 1e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 55 1e-06
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 54 2e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 3e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 52 9e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 51 2e-05
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 50 3e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 50 5e-05
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 49 9e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 2e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 48 2e-04
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 45 0.001
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 44 0.002
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.006
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 42 0.010
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 42 0.010
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 41 0.017
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 41 0.023
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 41 0.023
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 40 0.030
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.053
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.053
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.069
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.092
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 39 0.092
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 37 0.28
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.37
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 37 0.37
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 36 0.49
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 36 0.65
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 35 1.1
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 35 1.5
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 2.6
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 33 4.6
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.0
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 32 8.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 118 bits (283), Expect = 1e-25
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIPYXLSCMDSSXF-IILSLP 559
ISSI+GA N+ITT N+R+ N+SFD +P + + + F ++LSLP
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLP 197
Score = 76.6 bits (180), Expect = 4e-13
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 258 I*DFDSYPPPL 290
F PP L
Sbjct: 96 NMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 114 bits (274), Expect = 2e-24
Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIPYXLSCMD-SSXFIILSLP 559
ISSI+GA N+ITT N+R+ +SFD +P + + ++ ++LSLP
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLP 173
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 261 *DFDSYPPPL 290
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 98.3 bits (234), Expect = 1e-19
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+GA N+ITT N+R ++ IP + S + ++ ++LSLP
Sbjct: 156 LSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLP 201
Score = 65.7 bits (153), Expect = 7e-10
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 261 *DFDSYPPPLY 293
F PP L+
Sbjct: 101 ISFWLLPPALF 111
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 97.1 bits (231), Expect = 2e-19
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISSI+GA N+ITT N++ IS P + S + ++ ++LSLP
Sbjct: 156 ISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLP 201
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 100 NMSFWLXPP 108
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 95.5 bits (227), Expect = 8e-19
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+GA N+ITT N+R + + + + S ++ ++LSLP
Sbjct: 138 VSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLP 183
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 261 *DFDSYPPPL 290
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 94.7 bits (225), Expect = 1e-18
Identities = 51/93 (54%), Positives = 59/93 (63%)
Frame = -3
Query: 289 KGGG*ESKSYIIIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 110
K GG + IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 109 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNL 11
PI PG PNSARIKSL DVP +P PK+KYN+
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/81 (48%), Positives = 47/81 (58%)
Frame = -1
Query: 507 GIGSNDILXNRIXIXVVXXXXXXXXXXXXAKCSEKIARSTDLPLCAILDESGG*TVHPVP 328
G+ S I +R+ I VV AKC+EKI STD P CAI SGG TVHPVP
Sbjct: 53 GMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVP 112
Query: 327 APFSTILLEINNIREGGRSQN 265
P STI L + ++EGG +QN
Sbjct: 113 TPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 93.5 bits (222), Expect = 3e-18
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+GA N+ITT N++ IS P + + + ++ ++LSLP
Sbjct: 155 VSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLP 200
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/69 (50%), Positives = 41/69 (59%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 99 NMSFWLLPP 107
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 92.7 bits (220), Expect = 5e-18
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISSI+GA N+ITT N++ IS P + + + ++ ++LSLP
Sbjct: 144 ISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLP 189
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 88 NMSFWLLPP 96
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 92.7 bits (220), Expect = 5e-18
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+GA N+ITT N++ I+ P + S + ++ ++LSLP
Sbjct: 155 VSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLP 200
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/69 (50%), Positives = 41/69 (59%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 99 NMSFWLLPP 107
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 91.9 bits (218), Expect = 9e-18
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+I T N+R ++ +P + S ++ ++LSLP
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLP 201
Score = 43.2 bits (97), Expect = 0.004
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 91.9 bits (218), Expect = 9e-18
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+I T N+R ++ +P + S ++ ++LSLP
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLP 201
Score = 43.2 bits (97), Expect = 0.004
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 91.5 bits (217), Expect = 1e-17
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+ITT N+R ++ +P + + ++ ++LSLP
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLP 200
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 91.5 bits (217), Expect = 1e-17
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+ITT N+R ++ +P + + ++ ++LSLP
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLP 200
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 91.5 bits (217), Expect = 1e-17
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+ITT N+R ++ +P + + ++ ++LSLP
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLP 200
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+GA N+ITT N++ ++ P + S + ++ ++LSLP
Sbjct: 155 VSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLP 200
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 258 I*DFDSYPPPL 290
F PP L
Sbjct: 99 NMSFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 90.2 bits (214), Expect = 3e-17
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+I T N+R +S +P + + ++ ++LSLP
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLP 201
Score = 41.9 bits (94), Expect = 0.010
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 90.2 bits (214), Expect = 3e-17
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI+G+ N+ITT N+R ++ +P + S + ++ ++LSLP
Sbjct: 158 VSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLP 203
Score = 52.0 bits (119), Expect = 9e-06
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 101 NNISFWLLPPSL 112
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 88.6 bits (210), Expect = 9e-17
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ SI+GA N+I+T N+R ++
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 494 FDPIPYXLSCMD-SSXFIILSLP 559
+P + ++ ++ ++LSLP
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLP 119
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+I T N+R ++ +P + + + ++ ++L+LP
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLP 201
Score = 41.1 bits (92), Expect = 0.017
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 85.8 bits (203), Expect = 6e-16
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +2
Query: 254 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Query: 434 IIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
++GA N+ITT N+R + ++ +P + + + ++ ++LSLP
Sbjct: 164 LLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLP 206
Score = 42.7 bits (96), Expect = 0.006
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 85.8 bits (203), Expect = 6e-16
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
SSI+GA N+I+T N+R S IP + S + ++ ++L++P
Sbjct: 163 ASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVP 208
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 106 NNISFWLLPPSL 117
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 83.8 bits (198), Expect = 2e-15
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
SSI+GA N+ITT N+R + D + + S ++ ++LSLP
Sbjct: 139 ASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLP 184
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 83.4 bits (197), Expect = 3e-15
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDP-IPYXLSCMDSSXFIILSLP 559
ISS++GA N++TT N+R I I + + + ++ ++LSLP
Sbjct: 156 ISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLP 201
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRL 98
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI GA N + T N+R + + +P + S + ++ IIL+LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALP 218
Score = 41.1 bits (92), Expect = 0.017
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI GA N + T N+R + + +P + S + ++ IIL+LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALP 218
Score = 41.1 bits (92), Expect = 0.017
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI GA N + T N+R + + +P + S + ++ IIL+LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALP 218
Score = 41.1 bits (92), Expect = 0.017
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
+SSI GA N + T N+R + + +P + S + ++ IIL+LP
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALP 218
Score = 41.1 bits (92), Expect = 0.017
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 80.6 bits (190), Expect = 2e-14
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
ISS++GA N+I T N+R I + + + + ++ ++LSLP
Sbjct: 182 ISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLP 227
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 75.4 bits (177), Expect = 9e-13
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 412
P NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 413 HLAGISSIIGAXNYITTXXNIRLXNI 490
HL+G+SS++G+ N+ITT N+R I
Sbjct: 184 HLSGVSSLLGSINFITTVANMRTPGI 209
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 258 I*DFDSYPPPL 290
F PP L
Sbjct: 128 NISFWLLPPSL 138
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
SSI+G+ N+ITT N+R ++ +P + S ++ ++LSLP
Sbjct: 261 ASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLP 306
Score = 37.5 bits (83), Expect = 0.21
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 251
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 252 I 254
+
Sbjct: 203 L 203
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 74.1 bits (174), Expect = 2e-12
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +2
Query: 320 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFD 499
NGAGTG TVY PLS++ G +VD+AI SLH+AG SSI+GA N+ITT N+R ++
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 500 PIP-YXLSCMDSSXFIILSLP 559
+P + S + ++ ++L+LP
Sbjct: 223 KMPLFVWSVLVTAFLLLLALP 243
Score = 36.3 bits (80), Expect = 0.49
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/70 (48%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 353 PLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMD 529
PL+S+IAH G SVD+AIFSLHLAG+SSI+G+ N++TT N+R ++ D +P + +
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 530 SSXFIILSLP 559
++ ++LSLP
Sbjct: 132 TTVLLLLSLP 141
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +2
Query: 311 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNI 490
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SSI+GA +I+T +R +
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASSIMGAMYFISTIIIMRAMGV 71
Query: 491 SF 496
+
Sbjct: 72 FY 73
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
I SI+ A N+I T + + +P + S +S +I+++P
Sbjct: 159 IGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIP 204
Score = 40.7 bits (91), Expect = 0.023
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 66.5 bits (155), Expect = 4e-10
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 261 *DFDSYPPPLYY 296
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 38.3 bits (85), Expect = 0.12
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 380 GRSVDLAIFSLHLAGISSIIGA 445
G SVDLAIF LHLAG+SSI+G+
Sbjct: 122 GPSVDLAIFPLHLAGVSSILGS 143
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.3 bits (152), Expect = 9e-10
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 100 NMSFWLLPP 108
Score = 33.1 bits (72), Expect = 4.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 361
P NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIPYXL--SCMDSSXFIILSLP 559
+SSI G+ N++ T N+R+ + F + L + +S ++ S+P
Sbjct: 157 MSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVP 203
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 62.1 bits (144), Expect = 9e-09
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 323 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISF 496
G G VYPP SS +AH +VDL IF LHLAGISS +G+ N++ T N++ +++
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNY 168
Score = 32.3 bits (70), Expect = 8.0
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +3
Query: 84 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII* 263
L G +IG QI VTA A L PL +GAP +A PR+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 264 DFDSYPPPL 290
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S + + N+ITT +++
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFV 183
Query: 494 FDPI-PYXLSCMDSSXFIILSLP 559
D I P S + +S ++LSLP
Sbjct: 184 IDRISPAAWSIVLTSFLLLLSLP 206
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.3 bits (137), Expect = 6e-08
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 409
P NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 332 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP 508
+G T+YPPLS+ A G ++DL++ +H+ GISS IG+ NYITT R ++F I
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 509 -YXLSCMDSSXFIILSLP 559
Y S + +S +I SLP
Sbjct: 195 IYNFSIIVTSILLIGSLP 212
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 323 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDP 502
G G G T+YPPLS G VD +FSLHLAG+SS+IG+ N+I+T + +SF+
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFS----RLSFNC 271
Query: 503 IPYXLSCMDSSXFIILSLP 559
+ + +S ++LSLP
Sbjct: 272 SIIVWAYLFTSVLLLLSLP 290
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +2
Query: 317 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
E G GTG T+YPPLS+++ +VD+ IF L ++G++SI+ + N+ITT ++R ++
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLT 183
Query: 494 FDPIPYXL-SCMDSSXFIILSLP 559
+ S + +S ++L+LP
Sbjct: 184 LGILSVSTWSLIITSGMLLLTLP 206
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 52.0 bits (119), Expect = 9e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPI 505
AG G T Y PLS+N+ G L + ++ + G+SS +GA NYITT +R +++ +
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 506 P 508
P
Sbjct: 215 P 215
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 102 NNISFWLLPPSL 113
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
+ G G+ T YPPLS S+D I LH GI S++GA N++ T N+R ++
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 494 FDPIP-YXLSCMDSSXFIILSLP 559
D I + + +S ++LS+P
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVP 210
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P+ N + F I+ A TG YPPLS VD +S+ ++G
Sbjct: 134 PSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISG 193
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
I +II + N+ITT +R + F+ I + +C+ S+ I++S P
Sbjct: 194 IGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISFP 239
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPI 505
A G T YPPLSS SV+ ++FSLHLAGI+S+I + N++ T R ++ +
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATR-TSLWYSLS 166
Query: 506 PYXLSCMDSSXFIILSLP 559
+ S + S ++LSLP
Sbjct: 167 LFCWSIVLVSLLLVLSLP 184
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 47.6 bits (108), Expect = 2e-04
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 335 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP-Y 511
G T YPPLS G +L I SL L G SSI+GA N++TT +R+ ++ +P +
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 512 XLSCMDSSXFIILSLP 559
+ + +S I+LS P
Sbjct: 196 CWAMLATSSLILLSTP 211
Score = 32.3 bits (70), Expect = 8.0
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 261 *DFDSYPP 284
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 425 ISSIIGAXNYITTXXNIRLXNISF-DPIPYXLSCMDSSXFIILSLP 559
ISSI+ + N + T R SF + + + ++ +I++LP
Sbjct: 158 ISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLP 203
Score = 39.5 bits (88), Expect = 0.053
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 96 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
G L GD Q YN ++T+H N +P++ G PD+ FPR+
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRL 100
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 350 PPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIPYXL-SCM 526
PP S I+ G + D+ IF L + GISSI+G+ N+I T + ++S +P S +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 527 DSSXFIILSLP 559
SS ++++LP
Sbjct: 192 SSSLIVLVALP 202
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Frame = +2
Query: 326 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNI 490
A TG T+Y PLS N A+ G VDL + LHL+G+S+ +G+ N+I T R N+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 491 SFDPIP-YXLSCMDSSXFIILSLP 559
S+ + + + + S I+ + P
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFP 287
Score = 41.5 bits (93), Expect = 0.013
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
EL +PG + + YN+++T+H N L+PL++GA D+AFPRI
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 261 *DFDSYPP 284
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 43.6 bits (98), Expect = 0.003
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +2
Query: 314 VENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRL 481
+E G +G +YPPLS+ ++ G + + + S+ L IS ++G NYITT N+R+
Sbjct: 166 LETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRV 225
Query: 482 XNISFDPIPYXLSCMDSSXFI-ILSLP 559
+SF +P + + I +LS P
Sbjct: 226 KGMSFTRLPLTIWAFFITAIIGLLSFP 252
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.7 bits (96), Expect = 0.006
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 41.9 bits (94), Expect = 0.010
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 347 YPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSC 523
Y PLSS + VD I L + GI S+ GA N T N+R +S +P +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 524 MDSSXFIILSLP 559
+ + IIL+LP
Sbjct: 208 LMQAILIILALP 219
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 41.9 bits (94), Expect = 0.010
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 317 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS- 493
++G G T+YPPLS+ + VDL + + +AG SS + N+I T +R +I
Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKM 183
Query: 494 FDPIPYXLSCMDSSXFIILSLP 559
D + S + +S ++ +LP
Sbjct: 184 LDMSLFAWSVLAASMLMVTALP 205
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 41.1 bits (92), Expect = 0.017
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 320 NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNI 490
+GA G T YPPLS ++ G + L + + G+SS++G+ NY+TT +R +
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 491 SFDPIPYXLSCM 526
+ +P + M
Sbjct: 215 TMFRLPLTIWAM 226
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
+ Y +VT HA N L+PL++GA D+AFP +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTL 131
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 40.7 bits (91), Expect = 0.023
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPI 505
A TG YPPL+ G VD I++L L+G+ + + N++ T +R + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 506 P-YXLSCMDSSXFIILSLP 559
P + +C ++ I+ S P
Sbjct: 226 PIFTWTCTWANVLIVASFP 244
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 40.7 bits (91), Expect = 0.023
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPI 505
A T T+Y PLS ++ +VD+ + LHL G+S+ +GA N+I T R ++ + +
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 506 P-YXLSCMDSSXFIILSLP 559
+ + + S I+ + P
Sbjct: 237 DIFSWTMLTQSGLILFAFP 255
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 40.3 bits (90), Expect = 0.030
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 326 AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFD 499
A +G YPP+S + + H L I ++ L+GISSI+GA N++TT +R + F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 500 PIP 508
+P
Sbjct: 206 RMP 208
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 39.5 bits (88), Expect = 0.053
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I D YN T H N ++PL+LGA D+AFPR+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
Score = 37.1 bits (82), Expect = 0.28
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 311 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNI 490
++ G TG T Y P S AH +V +F + G SSI+ N+I T +R I
Sbjct: 146 MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGI 202
Query: 491 SFDPIP-YXLSCMDSSXFIILSLP 559
++ +P + + +S +L+ P
Sbjct: 203 TWFKMPLFVWAIYATSCIQVLATP 226
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.5 bits (88), Expect = 0.053
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 261 *DFDSY 278
F Y
Sbjct: 123 LSFYVY 128
Score = 36.7 bits (81), Expect = 0.37
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 311 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNI 490
+V+ GA TG T Y P S+ + V L F L G SSI+ N+I T +R +
Sbjct: 139 MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGM 195
Query: 491 SFDPIP-YXLSCMDSSXFIILSLP 559
+ +P + S +S IL+ P
Sbjct: 196 GWTRLPLFVWSIYATSVIQILATP 219
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.069
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 38.7 bits (86), Expect = 0.092
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 93 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
Score = 33.9 bits (74), Expect = 2.6
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 341 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISF 496
T YPP S N + L +F +HL G SSI A N++ T +R +F
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTF 134
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 38.7 bits (86), Expect = 0.092
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 ENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
E+GA G T+Y PL++ I G +DLA ++ L +S +G N++ T +R I
Sbjct: 127 ESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIG 186
Query: 494 FDPIP 508
+ +P
Sbjct: 187 WFKMP 191
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 37.1 bits (82), Expect = 0.28
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 425 ISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSLP 559
I +++ N++ T +R ++ +P + + + + I+ + P
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFP 240
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.37
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 36.7 bits (81), Expect = 0.37
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
V G Y PL+ VD I + L G++SI GA N+I T N+R ++
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 494 FDPIP 508
+ +P
Sbjct: 196 LNRMP 200
Score = 32.3 bits (70), Expect = 8.0
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
+LG P + +YN + T H N +VPL++GA D+AFPR+
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRL 115
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 36.3 bits (80), Expect = 0.49
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 347 YPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP 508
Y PL+S G ++D+ + L GIS+ GA N++ T +R +S D +P
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLP 218
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 35.9 bits (79), Expect = 0.65
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 332 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP- 508
+G +YPPL+S + G + D + + IS+I A + T R +S D +P
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 509 YXLSCMDSSXFIILSLP 559
Y + ++ I+ P
Sbjct: 200 YGWYALVTATMILTGFP 216
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.1 bits (77), Expect = 1.1
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 335 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP-Y 511
G T Y P S A VD + ++ L G SS++G N++ T N+R +S +P Y
Sbjct: 138 GWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 512 XLSCMDSSXFIILSL 556
S +S + SL
Sbjct: 195 VWSVFAASVLNLFSL 209
Score = 33.5 bits (73), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 34.7 bits (76), Expect = 1.5
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPI 505
A G T+Y PLS I G D+ I + GI S+ A N +TT +R ++ +
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 506 P 508
P
Sbjct: 208 P 208
Score = 33.5 bits (73), Expect = 3.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.9 bits (74), Expect = 2.6
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 259 YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 414
+KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 323 GAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNIS 493
G G T YP L+ G + + + G SS++G+ NY+TT N+R ++
Sbjct: 159 GPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMT 218
Query: 494 FDPIP 508
F +P
Sbjct: 219 FFRLP 223
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 277 TPLPYIINFKKNCRKWCRN 333
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.3 bits (70), Expect = 8.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 380 GRSVDLAIFSLHLAGISSIIGAXNYITTXXNIRLXNISFDPIP-YXLSCMDSSXFIILSL 556
G L IFSL + S I A N+I+ N+R ++ D I S + ++ ++LSL
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 557 P 559
P
Sbjct: 184 P 184
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,083,078
Number of Sequences: 1657284
Number of extensions: 6363463
Number of successful extensions: 11503
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 11151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11466
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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