Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0983
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.7  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +2

Query: 212 IFYVCYDVYKIKCFFF 259
           +F+VC+  Y + C ++
Sbjct: 283 VFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +2

Query: 212 IFYVCYDVYKIKCFFF 259
           +F+VC+  Y + C ++
Sbjct: 283 VFFVCWTPYYVMCIWY 298


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 440 NYTV--FLNLDPKFKTKCVIFTN 378
           NY +  F+N+DP+   K  IF N
Sbjct: 302 NYYIAHFINIDPENHNKTEIFLN 324


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 203 DYFVQFQLNNIRT*RLTIMSSNTM*TLRNRD 111
           D   QF   N+R   + I  SN +   RNRD
Sbjct: 652 DTLQQFLTPNMRVQEVVIQFSNRIVKPRNRD 682


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,757
Number of Sequences: 336
Number of extensions: 2345
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)