Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0973
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   1.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   1.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.7  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 125 LVHADLDEFRDVRRHARRYAYTKTFKRYLH 36
           L+H D    RD+    R++A T  F  YL+
Sbjct: 370 LIHTDTYFLRDIIFAIRQHAVTAKFPIYLY 399


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 125 LVHADLDEFRDVRRHARRYAYTKTFKRYLH 36
           L+H D    RD+    R++A T  F  YL+
Sbjct: 372 LIHTDTYFLRDIIFAIRQHAVTAKFPIYLY 401


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 125 LVHADLDEFRDVRRHARRYAYTKTFKRYLH 36
           L+H D    RD+    R++A T  F  YL+
Sbjct: 370 LIHTDTYFLRDIIFAIRQHAITAKFPIYLY 399


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 125 LVHADLDEFRDVRRHARRYAYTKTFKRYLH 36
           L+H D    RD+    R++A T  F  YL+
Sbjct: 372 LIHTDTYFLRDIIFAIRQHAITAKFPIYLY 401


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 82  TPGGMLIRRPSSAIFMP 32
           +PGGM++  PS+++  P
Sbjct: 695 SPGGMVLPSPSTSVASP 711


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 82  TPGGMLIRRPSSAIFMP 32
           +PGGM++  PS+++  P
Sbjct: 587 SPGGMVLPSPSTSVASP 603


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,766
Number of Sequences: 336
Number of extensions: 1365
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)