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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0973
         (501 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 39   0.003
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 38   0.005
SB_30278| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.006
SB_6315| Best HMM Match : GBP_PSP (HMM E-Value=5.2)                    38   0.006
SB_59282| Best HMM Match : Pkinase_Tyr (HMM E-Value=9.6e-10)           36   0.025
SB_23401| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.033
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 33   0.17 
SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.31 
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.40 
SB_28697| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.53 
SB_46968| Best HMM Match : Pkinase_Tyr (HMM E-Value=8e-08)             31   0.71 
SB_41930| Best HMM Match : Pkinase_Tyr (HMM E-Value=9.4e-10)           31   0.71 
SB_10993| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.3e-38)           31   0.71 
SB_52372| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.8e-35)           31   0.71 
SB_23137| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 31   0.71 
SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)                     29   1.6  
SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.6  
SB_43850| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_22969| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_22883| Best HMM Match : Pkinase (HMM E-Value=6.4e-12)               28   3.8  
SB_18129| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.0  
SB_12392| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   6.6  
SB_58457| Best HMM Match : Guanylate_cyc (HMM E-Value=0)               27   6.6  
SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34)          27   6.6  
SB_18109| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)               27   8.7  
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 27   8.7  
SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07)               27   8.7  

>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 893

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 12  DLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
           D+  +     +A+  L + IP         L+  C N+DP KRP+F+ +L  LE++
Sbjct: 290 DVEALAVAYGVAMNSLTLPIPTTCPEVFKNLMADCWNQDPHKRPTFKAVLEALEEI 345


>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 1038

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMK 182
           +G R+  P G  P I +++K C N DP  RP F+ +L  L+++K
Sbjct: 798 QGYRMPPPMGTPPTIYQIMKDCWNIDPEARPKFDELLRRLKQVK 841


>SB_30278| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 75

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 54  GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
           G+ +  P     HI  ++K C N+DP +RP+F+MI+
Sbjct: 1   GVHLGKPEDCPDHIYDVMKSCWNKDPSQRPNFQMII 36


>SB_6315| Best HMM Match : GBP_PSP (HMM E-Value=5.2)
          Length = 119

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 54  GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
           G+ +  P     HI  ++K C N+DP +RP+F+MI+
Sbjct: 1   GVHLGKPEDCPDHIYDVMKSCWNKDPSQRPNFQMII 36


>SB_59282| Best HMM Match : Pkinase_Tyr (HMM E-Value=9.6e-10)
          Length = 199

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 60  RISIPPGVSPHISK-LIKICMNEDPGKRPSFEMILPILEKM 179
           R  +PP  +P   + L+ IC +E P +RP+F  +L IL+KM
Sbjct: 155 RPQVPPDSAPSAYRELMAICWDEVPERRPTFSGVLKILKKM 195


>SB_23401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 380

 Score = 35.1 bits (77), Expect = 0.033
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 36  MKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
           + + + G R+S PP     I  ++  C N +P  RPSF  +  +LE +
Sbjct: 306 LSMLMSGFRLSRPPLCPEEIYDVMMSCWNAEPEVRPSFAKLCTVLESL 353


>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 2629

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           EG R+  PP V   +  ++  C  EDP +RP+F+ +   ++ ++R
Sbjct: 376 EGYRMPKPPHVGDALYCVMLRCWQEDPDERPTFDELRDNMQALQR 420


>SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 54  GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR*F 191
           G R  +   +   I +LI  C ++DP KRPSF  I+  L  + + F
Sbjct: 130 GRRPPLIKNIPKPIEELITSCWDKDPDKRPSFSRIVIFLNHLMQFF 175


>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1052

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 21   PMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
            P+E   ++   G R+ +P      +  ++  C NE+P  RPSF  +    +KM
Sbjct: 956  PVEKLFELLKSGYRMQMPQKCPDKMYDIMLSCWNENPNARPSFTELRAEFDKM 1008


>SB_28697| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  GRVASHLETHQDLHERGSRETTIFRNDPTDFREDE 181
           G V+ +L THQD    GS+E T  +ND  D  + E
Sbjct: 2   GFVSLNLRTHQDTRSNGSQELTNLKNDIHDEEKRE 36


>SB_46968| Best HMM Match : Pkinase_Tyr (HMM E-Value=8e-08)
          Length = 143

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           +G R+  P   S  +  ++  C N +P  RPSF  I+  LE++ R
Sbjct: 65  QGYRLEKPSCCSQELYAIMYECWNPEPKNRPSFSDIVHRLEEILR 109


>SB_41930| Best HMM Match : Pkinase_Tyr (HMM E-Value=9.4e-10)
          Length = 597

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 87  PHISKLIKICMNEDPGKRPSFEMILPILEKM 179
           P I+K IK C +E+P  RP+F  I   + K+
Sbjct: 539 PTITKFIKQCWSEEPSARPTFRDIKKSMRKI 569


>SB_10993| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.3e-38)
          Length = 344

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 9   ADLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           A +S +E  +K   +G R+  P   S  +  L+  C N +P  RP+F  I+  LE+  R
Sbjct: 247 AGMSGVEI-LKRLKQGYRLEKPSCCSQELYALMYECWNPEPKNRPAFSDIVSRLEETLR 304


>SB_52372| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.8e-35)
          Length = 185

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 36  MKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMI 158
           +K   + LR+  P     +++ ++K C   +P  RP+F+MI
Sbjct: 132 LKCVKDDLRLPKPDNCPDNMANVMKKCWEPNPNDRPNFDMI 172


>SB_23137| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 1022

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 9    ADLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
            A +S +E  +K   +G R+  P   S  +  L+  C N +P  RP+F  I+  LE+  R
Sbjct: 925  AGMSGVEI-LKRLKQGYRLEKPSCCSQELYALMYECWNPEPKNRPAFSDIVSRLEETLR 982


>SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 200

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +2

Query: 14  SVTNGVRHEDSA*RSSYKHTSGRVASHLETHQDLHERGSRETTIFRNDPTDFREDETLIL 193
           S++  V+H       S   T   V+ H E +  L  RG   +T+F   P     D T+ L
Sbjct: 96  SLSKSVKHSPHCESVSESSTVHTVSHHYE-YTWLRNRGVDSSTLFEGTPLSLHADITISL 154

Query: 194 LNDTI 208
             D I
Sbjct: 155 YKDAI 159


>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 870

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 75  PGVSPHISKLIKICMNEDPGKRPSFEMIL 161
           P +SP    ++K+C+  DP +RP+   +L
Sbjct: 199 PRISPMAVDMLKLCLKMDPSERPTCAQLL 227


>SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 823

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 21  PMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
           P+E  +    EG R++ P    P I  ++  C + +P +RP+F  ++  +E++
Sbjct: 568 PLEQLLDYINEGKRMAQPRDCPPEIYAIMCDCWSLEPDRRPTFAELVRRIERI 620


>SB_43850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1926

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 51   EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPIL 170
            EG  +  P G       L+K C   DP +RP  + I+ +L
Sbjct: 1775 EGNSMDPPQGAQQQFGDLLKSCWLTDPNERPEPDKIMDLL 1814


>SB_22969| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 817

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           EG R+  P  V   +  ++  C  EDP +RP+F+ +   ++ ++R
Sbjct: 705 EGYRMPKPLHVGDALYCVMLRCWQEDPDERPTFDELRDNMQTLQR 749


>SB_22883| Best HMM Match : Pkinase (HMM E-Value=6.4e-12)
          Length = 326

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 66  SIPPGVSPHISKLIKICMNEDPGKRPSFEMI 158
           SIP  V   +S L+K  +N DP KR + E I
Sbjct: 215 SIPDEVDDSLSDLLKGMLNPDPEKRLTIEQI 245


>SB_18129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 367

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 24  MECGMKIALE---GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILE 173
           ME G  I  E   G R+  PP     I  L+    + +P  RPSFE+I+  +E
Sbjct: 184 METGQDILSEVKRGYRLEQPPECDDKIYALMLDTWDPNPLNRPSFEVIVNRVE 236


>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 525

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 54  GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILE 173
           G R+  PP  S     ++  C  ++   RP+FE +  +LE
Sbjct: 471 GYRMPKPPNASDSFYAIMLECWKKNEADRPTFEYLQSVLE 510


>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 518

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEK 176
           G R+  P        +++K C  +DP +RP+FE +   LE+
Sbjct: 464 GYRMPKPNNCPERFYEIMKDCWKKDPMQRPTFETLSWQLEE 504


>SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 982

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
           EG R+  P      +  L+  C +E+P +RP+F  I+
Sbjct: 767 EGYRMEQPVNCQDDVYALMLRCWHENPNQRPTFAEIV 803


>SB_12392| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 515

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 60  RISIPPGVSPHISKLIKICMNEDPGKR 140
           ++ +PP +   + K+I  C   DP KR
Sbjct: 288 KVKVPPDLKGDLRKIIASCRESDPAKR 314


>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1533

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +2

Query: 8   SGSVTNGVRHEDSA*RSSYKHTSGRVASHLETHQDLHERGSRETTIFRNDPTDFREDETL 187
           S SV   +  E S    SY++   R+AS  E HQ   + G+  +    N  TD +E + L
Sbjct: 229 SVSVFGCLEGEASCVYCSYRYQGARLASITEVHQFQEKTGACPS----NASTDRQESDAL 284

Query: 188 ILLNDTINP 214
           +     + P
Sbjct: 285 VTTEVNVQP 293


>SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 557

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 69  IPPGVSPHISKLIKICMNEDPGKRPSFEMIL--PILEK 176
           +P   S  +  +IK  +++DP KRPS   +L  P ++K
Sbjct: 179 LPKQYSTDLCSIIKSMLDQDPDKRPSASRLLRHPYIKK 216


>SB_58457| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
          Length = 410

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 93  ISKLIKICMNEDPGKRPSFEMILPILEKM 179
           + +L+K C +E+P  RP F  I  I+ K+
Sbjct: 28  LRELMKQCWDENPDMRPDFNEIKKIMNKI 56


>SB_28889| Best HMM Match : ANF_receptor (HMM E-Value=1.1e-34)
          Length = 933

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 93  ISKLIKICMNEDPGKRPSFEMILPILEKMK 182
           ++KL+  C N+DP  RP+F  I   L  +K
Sbjct: 661 VTKLMTQCWNDDPQARPTFSDIKRQLRLLK 690


>SB_18109| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 59

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 93  ISKLIKICMNEDPGKRPSFEMILPILEKMK 182
           ++KL+  C N+DP  RP+F  I   L  +K
Sbjct: 27  VTKLMTQCWNDDPQARPTFSDIKRQLRLLK 56


>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
          Length = 801

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +3

Query: 81  VSPHISKLIKICMNEDPGKRPSFEMIL 161
           +SP + ++++ C+ +DP  RP+ + +L
Sbjct: 760 ISPDVKQIVERCIQDDPTLRPTVKDLL 786


>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1616

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = +3

Query: 72   PPGVSPHISKLIK----ICMNEDPGKRPSFEMIL 161
            PP ++ + SK  K    +C+N+DP  RP+ + +L
Sbjct: 1024 PPELTGNFSKAFKEFVSLCLNKDPNDRPTAKELL 1057


>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1604

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 39   KIALEGLRISIPPGVSPH--ISKLIKICMNEDPGKRPSFEMILPILEKM 179
            ++A +GL+ +    V  H  +  L+  C   DP +RP+F  +L  ++K+
Sbjct: 1363 RVACKGLKGTSLVCVKIHDYLYDLMLRCWQHDPAQRPTFTQLLETIDKI 1411


>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 526

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 51  EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR*F 191
           +G R+  P G  P + ++++     +P  RP+F  I   L+K+   F
Sbjct: 479 KGYRMESPDGCPPEVYQIMRDSWEMNPNARPTFGDIHRRLDKIHNSF 525


>SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07)
          Length = 253

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = +3

Query: 72  PPGVSPHISKLIK----ICMNEDPGKRPSFEMIL 161
           PP ++ + SK  K    +C+N+DP  RP+ + +L
Sbjct: 90  PPELTGNFSKAFKEFVSLCLNKDPNDRPTAKELL 123


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,760,064
Number of Sequences: 59808
Number of extensions: 174750
Number of successful extensions: 691
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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