Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0973
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative inte... 95 3e-20
AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arr... 95 3e-20
AF067607-4|AAF98610.2| 390|Caenorhabditis elegans Hypothetical ... 35 0.038
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 33 0.088
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 32 0.20
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 32 0.20
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 32 0.20
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 32 0.27
U38377-4|AAA79746.2| 347|Caenorhabditis elegans Map kinase kina... 32 0.27
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 31 0.36
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 31 0.36
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 31 0.36
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 31 0.36
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 31 0.62
AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical ... 31 0.62
Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical p... 29 1.4
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical pr... 29 1.4
U00036-10|AAP82638.1| 276|Caenorhabditis elegans Hypothetical p... 29 1.4
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 29 1.4
Z48795-3|CAA88727.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z70035-11|CAA93872.1| 388|Caenorhabditis elegans Hypothetical p... 29 2.5
U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase ... 28 3.3
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 28 3.3
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 28 3.3
AC006795-2|AAF59493.3| 421|Caenorhabditis elegans Hypothetical ... 28 3.3
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 28 4.4
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 28 4.4
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 27 5.8
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 27 5.8
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 27 5.8
AF026213-10|AAB71301.1| 478|Caenorhabditis elegans Protein kina... 27 5.8
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 27 5.8
>AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative
integrin-linked kinase protein.
Length = 449
Score = 95.1 bits (226), Expect = 3e-20
Identities = 38/57 (66%), Positives = 52/57 (91%)
Frame = +3
Query: 9 ADLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
+DL PMECGMKIALEGLR+ IPPG++ ++++L+ ICMNEDPG+RP+F+ I+PILE+M
Sbjct: 391 SDLPPMECGMKIALEGLRVHIPPGIARNMNRLMNICMNEDPGRRPNFDQIIPILERM 447
>AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arrest
at two-fold protein4 protein.
Length = 466
Score = 95.1 bits (226), Expect = 3e-20
Identities = 38/57 (66%), Positives = 52/57 (91%)
Frame = +3
Query: 9 ADLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
+DL PMECGMKIALEGLR+ IPPG++ ++++L+ ICMNEDPG+RP+F+ I+PILE+M
Sbjct: 408 SDLPPMECGMKIALEGLRVHIPPGIARNMNRLMNICMNEDPGRRPNFDQIIPILERM 464
>AF067607-4|AAF98610.2| 390|Caenorhabditis elegans Hypothetical
protein C18H7.4 protein.
Length = 390
Score = 34.7 bits (76), Expect = 0.038
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
G R+ P G+ ++ L+ C N DP KRP+ E + LE + +
Sbjct: 334 GYRMQPPEGMPKDVASLLAECWNHDPEKRPNAEKLKEKLEDLNQ 377
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 81 VSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
VSP ++ L+K C +E P RP E I +L +M
Sbjct: 784 VSPRLTTLVKDCWSEQPEDRPKAEQICKLLSEM 816
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
ZK1067.1 protein.
Length = 1323
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 51 EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR*FC*TTQLIRFN 221
+G R+S PP S + + + C DP RP FE+ + E+ K FC QL N
Sbjct: 1102 DGNRLSQPPNCSQDLYQELLRCWMADPKSRPGFEI---LYERFKE-FCKVPQLFLEN 1154
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 51 EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR*FC*TTQLIRFN 221
+G R+S PP S + + + C DP RP FE+ + E+ K FC QL N
Sbjct: 1102 DGNRLSQPPNCSQDLYQELLRCWMADPKSRPGFEI---LYERFKE-FCKVPQLFLEN 1154
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 51 EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR*FC*TTQLIRFN 221
+G R+S PP S + + + C DP RP FE+ + E+ K FC QL N
Sbjct: 1153 DGNRLSQPPNCSQDLYQELLRCWMADPKSRPGFEI---LYERFKE-FCKVPQLFLEN 1205
>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
protein F23H12.6 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.27
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 81 VSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
++P + LI+ C +EDP +RP+ +M+ +++ M
Sbjct: 745 INPAMLHLIRDCWDEDPKQRPNIDMVNKLMKNM 777
>U38377-4|AAA79746.2| 347|Caenorhabditis elegans Map kinase kinase
or erk kinaseprotein 1, isoform a protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.27
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 72 PPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
P SP +L++ C+ DP RP+++M+L
Sbjct: 291 PAKFSPDFCQLVESCLQRDPTMRPNYDMLL 320
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 30 CGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
CG K AL+ L + + + +L+ C + P KRPSF+ I+
Sbjct: 441 CGQKAALQRLDAQLQK-IDGKLHELLLECWSSQPEKRPSFQQIV 483
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 30 CGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
CG K AL+ L + + + +L+ C + P KRPSF+ I+
Sbjct: 481 CGQKAALQRLDAQLQK-IDGKLHELLLECWSSQPEKRPSFQQIV 523
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 30 CGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
CG K AL+ L + + + +L+ C + P KRPSF+ I+
Sbjct: 441 CGQKAALQRLDAQLQK-IDGKLHELLLECWSSQPEKRPSFQQIV 483
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 30 CGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMIL 161
CG K AL+ L + + + +L+ C + P KRPSF+ I+
Sbjct: 481 CGQKAALQRLDAQLQK-IDGKLHELLLECWSSQPEKRPSFQQIV 523
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P G + +++ C DP KRP+FE + LE +
Sbjct: 451 GYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQWKLEDL 492
>AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical
protein ZC581.7 protein.
Length = 395
Score = 30.7 bits (66), Expect = 0.62
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPS 146
G R+ P G+ I +++K+C + DP +RP+
Sbjct: 333 GYRLPTPKGMPWDIEEIMKLCWHVDPNQRPT 363
>Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical
protein T03D8.5 protein.
Length = 1012
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 93 ISKLIKICMNEDPGKRPSFEMILPILEKM 179
+S L++ C NE+P +RP+ E I +++ M
Sbjct: 721 MSLLVRDCWNENPDQRPTSEQIKTLMKSM 749
>Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFE 152
G R+ P S I + +K+C + DP KRP+F+
Sbjct: 308 GNRLPQPEHCSFRIYEFMKLCWSTDPIKRPTFD 340
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P G P + +L+ C N P RP F I LE +
Sbjct: 509 GFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENL 550
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P G P + +L+ C N P RP F I LE +
Sbjct: 514 GFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENL 555
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P G P + +L+ C N P RP F I LE +
Sbjct: 524 GFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENL 565
>Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFE 152
G R+ P S I + +K+C + DP KRP+F+
Sbjct: 308 GNRLPQPEHCSFRIYEFMKLCWSTDPIKRPTFD 340
>U00036-10|AAP82638.1| 276|Caenorhabditis elegans Hypothetical
protein R151.4a protein.
Length = 276
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 51 EGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
EG+R+ P S + L+K C N RPSF IL +E++
Sbjct: 217 EGMRLEQPAKCSDDMYILMKSCWNLKAEDRPSFLAILSKIEQI 259
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P G P + +L+ C N P RP F I LE +
Sbjct: 375 GFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENL 416
>Z48795-3|CAA88727.1| 414|Caenorhabditis elegans Hypothetical
protein R05H5.4 protein.
Length = 414
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
G R+ PP + + +++ C D KRP+ E + LE+ K+
Sbjct: 333 GYRLPPPPSMPSRMVEIMSECWQVDAEKRPTAEELKEKLEEFKK 376
>Z70035-11|CAA93872.1| 388|Caenorhabditis elegans Hypothetical
protein R09D1.13 protein.
Length = 388
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 MKIALEGLRISIPPGV-SPHISKLIKICMNEDPGKRPSF 149
M+ +G R+S P + SP I +KIC N P RP F
Sbjct: 315 MEYLEKGNRLSKPKYIDSPEIFDFMKICWNFKPETRPCF 353
>U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase
protein 26 protein.
Length = 433
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 15 LSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
+ P + ++A G R+ P I ++ C E+P RPS I IL+++
Sbjct: 333 MKPADVATQVA-NGYRMPPYPHAQAEIQTMMARCNAENPNDRPSMAEIAEILQRV 386
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 21 PMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMI 158
P +IA +G +SI KL++ C N +P RP F +
Sbjct: 401 PATIAFQIANKGQNLSIGDSCPDRWKKLMQDCWNLEPNFRPKFSTL 446
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 21 PMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMI 158
P +IA +G +SI KL++ C N +P RP F +
Sbjct: 401 PATIAFQIANKGQNLSIGDSCPDRWKKLMQDCWNLEPNFRPKFSTL 446
>AC006795-2|AAF59493.3| 421|Caenorhabditis elegans Hypothetical
protein Y50D4B.6 protein.
Length = 421
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 36 MKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
MK +G ++ P S I + ++ C N +P KRP F +K+
Sbjct: 346 MKYVRDGNQLPSPEHGSDKIYEFMQSCWNLNPDKRPVFSECRDFFQKL 393
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 93 ISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
++ +++ C EDP RPS + + +LE + +
Sbjct: 723 LASVVEKCWVEDPASRPSIQKVRELLEPLSK 753
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 102 LIKICMNEDPGKRPSFEMILPILEKM 179
LI+ C +E+P RPS ++I +L+ M
Sbjct: 764 LIRDCWSEEPADRPSADVICNLLKNM 789
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 81 VSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
++P + L++ C E P +RPS E + L M
Sbjct: 792 INPALLHLVRDCFTERPSERPSIETVRSQLRGM 824
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 81 VSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
++P + L++ C E P +RPS E + L M
Sbjct: 792 INPALLHLVRDCFTERPSERPSIETVRSQLRGM 824
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFE 152
G R + P I KL+K+C P KRP+F+
Sbjct: 238 GNRNAQPKYCPDEIYKLMKMCWKTSPKKRPTFK 270
>AF026213-10|AAB71301.1| 478|Caenorhabditis elegans Protein kinase
protein 9, isoform a protein.
Length = 478
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P I ++++C E P RP+F+ +L +M
Sbjct: 407 GKRLLKPEWCPEEIYDVMRLCWQELPDDRPAFQQTCAVLAQM 448
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 54 GLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKM 179
G R+ P I ++++C E P RP+F+ +L +M
Sbjct: 544 GKRLLKPEWCPEEIYDVMRLCWQELPDDRPAFQQTCAVLAQM 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,759,534
Number of Sequences: 27780
Number of extensions: 136701
Number of successful extensions: 439
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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