Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0973
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    31   0.009
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    31   0.009
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 30.7 bits (66), Expect = 0.009
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 42  IALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           + + G+R    P       +L++ C + +P KRP    I+P+LE +++
Sbjct: 814 LMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQ 861


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 0.009
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 42  IALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR 185
           + + G+R    P       +L++ C + +P KRP    I+P+LE +++
Sbjct: 852 LMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQ 899


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 80  RVASHLETHQDLHERGSRETTI 145
           R AS   TH   HE G+  TTI
Sbjct: 637 RDASLSSTHSHPHEPGAPATTI 658


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,603
Number of Sequences: 438
Number of extensions: 1538
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)