Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0971
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   2.2  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   3.0  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   6.8  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 132 SKYDYVFNQLSIIFHLLTFFIC 67
           SK+  V N+LS + + + F IC
Sbjct: 380 SKFGLVLNRLSFVVYCVIFIIC 401


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 128 STITCLINLVLYSIYLHFLYVCLVSYLNLEIKLVCSSQT 12
           S +T ++  VL  I + F Y+C+   LN   +    S+T
Sbjct: 269 SIVTSILQFVLPFIIMAFCYICVSIRLNDRARTKPGSKT 307


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 364 VAHQNPLHHEDFYRVPSSCVAWL 432
           V  ++  H ++ YR+PSS   W+
Sbjct: 868 VLERSMFHIQNAYRIPSSGCPWM 890


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,494
Number of Sequences: 2352
Number of extensions: 8917
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)