Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0971
         (562 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p pro...    28   7.5  
AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-P...    28   7.5  

>BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 233 C*LKVLYPEVFLKYCEWYRVFDVSSIKSYTFNLNLTY 343
           C L ++ PE   KY  W R   V   ++  FN  L +
Sbjct: 156 CKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQF 192


>AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-PA
           protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 233 C*LKVLYPEVFLKYCEWYRVFDVSSIKSYTFNLNLTY 343
           C L ++ PE   KY  W R   V   ++  FN  L +
Sbjct: 393 CKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQF 429


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,189,443
Number of Sequences: 53049
Number of extensions: 315917
Number of successful extensions: 566
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)