Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0969
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.0  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   7.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 172 GSPXLMRRPSVXKTSTLTPASLAN 243
           GS     +PSV  T+  TPASL++
Sbjct: 774 GSGSRCSKPSVTSTTPPTPASLSS 797


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = +1

Query: 121 AWMSPLLTWVPANEKCLG----SPXLMRRPSV 204
           +W  P LTW PA+   L      P ++ RP V
Sbjct: 92  SWNDPKLTWNPASYGNLNVVRWDPTIVWRPDV 123


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative
          Tyr/Ser/Thr phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 36 PKEYSEHELEKITRRFTLELA 98
          PK   E E EK+T RFT ELA
Sbjct: 23 PKPILEKEEEKLTVRFT-ELA 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.130    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,752
Number of Sequences: 2352
Number of extensions: 6821
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)