Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0969
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   138   2e-33
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF025456-3|AAB70956.1|  440|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  138 bits (334), Expect = 2e-33
 Identities = 62/106 (58%), Positives = 77/106 (72%)
 Frame = +3

Query: 9   GAKXGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADXY 188
           GAK G+KI+PK+Y+++E+EKITRR  +E AKKGF+GPGVDVPAPDMGTGEREM WIAD Y
Sbjct: 159 GAKGGVKIDPKQYTDYEIEKITRRIAIEFAKKGFLGPGVDVPAPDMGTGEREMGWIADTY 218

Query: 189 AKTVGFXDINAHACVTGKPINXVASTAEFQXRAXAVFHGLENXINE 326
           A+T+G  D +A AC+TGKPI               V+ GLE   N+
Sbjct: 219 AQTIGHLDRDASACITGKPIVSGGIHGRVSATGRGVWKGLEVFTND 264



 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 22/52 (42%), Positives = 26/52 (50%)
 Frame = +2

Query: 254 GGIXGRVSXTGXGSIPRXGELXQRSHYMSLIGXTPGWXRKTFIVQGXRXVGL 409
           GGI GRVS TG G           + YM ++G   G   KT I+QG   VGL
Sbjct: 241 GGIHGRVSATGRGVWKGLEVFTNDADYMKMVGLDTGLAGKTAIIQGFGNVGL 292


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 154 PVPMSGAGTSTPGPMNPFLASSRVKRRVIF 65
           P+PM    T+ P   N  LA + +KR+V F
Sbjct: 139 PLPMGDVSTAGPERNNQLLAPAMIKRKVEF 168


>AF025456-3|AAB70956.1|  440|Caenorhabditis elegans Hypothetical
           protein C46F9.2 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 296 IPRXGELXQRSHYMSLIGXTPGWXRKTFI 382
           I   G+L    H  S+ G TP W R TFI
Sbjct: 216 ISASGKLHSTEH-KSIFGATPAWGRDTFI 243


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 205 KPTVFA*XSAIQDISRSPVPMSGAGTSTPGPMNPFLASSRVKRRV 71
           +P V     A +  S  P+ M   G S+PG + P+  +    RR+
Sbjct: 697 RPYVKVFAKAFESFSGCPIRMPKLGASSPGALEPWTTTIISMRRI 741


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 205 KPTVFA*XSAIQDISRSPVPMSGAGTSTPGPMNPFLASSRVKRRV 71
           +P V     A +  S  P+ M   G S+PG + P+  +    RR+
Sbjct: 697 RPYVKVFAKAFESFSGCPIRMPKLGASSPGALEPWTTTIISMRRI 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.130    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,245,782
Number of Sequences: 27780
Number of extensions: 162784
Number of successful extensions: 430
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)