Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0961
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   5.3  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   7.0  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   7.0  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   7.0  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   7.0  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   7.0  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -3

Query: 162 AVTKILSLLVYGILKLS*AISHYSIQIFILLTTVKI*SLYGYFL 31
           AV  + + + Y ++ L    +HY   +FI+     + + +GY +
Sbjct: 529 AVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLI 572


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -3

Query: 162 AVTKILSLLVYGILKLS*AISHYSIQIFILLTTVKI*SLYGYFL 31
           AV  + + + Y ++ L    +HY   +FI+     + + +GY +
Sbjct: 529 AVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLI 572


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -3

Query: 162 AVTKILSLLVYGILKLS*AISHYSIQIFILLTTVKI*SLYGYFL 31
           AV  + + + Y ++ L    +HY   +FI+     + + +GY +
Sbjct: 507 AVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLI 550


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 194 LGNENCCRIPMLLQKFSA 141
           +GN+ CCR+   +Q+ SA
Sbjct: 874 IGNQECCRLLRRVQRKSA 891


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 191 GNENCCRIPMLL 156
           GN+ CCR P+L+
Sbjct: 29  GNKRCCRHPLLV 40


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 427 CGLPLQVAQQPPCSRPQVAEGFALCSSVELSSL 329
           CGL +QV +      P VAE F   +  + S L
Sbjct: 488 CGLTMQVLRNTVGIHPTVAEEFTRLAITKRSGL 520


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 427 CGLPLQVAQQPPCSRPQVAEGFALCSSVELSSL 329
           CGL +QV +      P VAE F   +  + S L
Sbjct: 464 CGLTMQVLRNTVGIHPTVAEEFTRLAITKRSGL 496


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 427 CGLPLQVAQQPPCSRPQVAEGFALCSSVELSSL 329
           CGL +QV +      P VAE F   +  + S L
Sbjct: 461 CGLTMQVLRNTVGIHPTVAEEFTRLAITKRSGL 493


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 205 LGTC*ATRTAVEFRCCYKNSQLVGLWYLE 119
           LGT      A  FRC   N QLV  +Y E
Sbjct: 107 LGTLYPGMRAPSFRCTETNGQLVLHYYSE 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,511
Number of Sequences: 2352
Number of extensions: 6957
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)